On Wed, Feb 17, 2010 at 03:47:24PM +0100, Michael Banck wrote: > On Wed, Feb 17, 2010 at 02:37:10PM +0100, Filippo Rusconi wrote: > > Package: avogadro > > Version: 1.0.0-2 > > Severity: important > > > > Greetings, > > > > Avogadro crashes when importing (File->Import->Fetch from PDB) with > > PDB code 3B75 (Crystal Structure of Glycated Human Haemoglobin > > DOI:10.2210/pdb3b75/pdb). > > > > The console only shows this: > > > > QStackedLayout::setCurrentWidget: Widget 0x9e23de8 not contained in stack > > libpng warning: Ignoring attempt to set cHRM RGB triangle with zero area > > Segmentation fault (core dumped) > > Indeed, I can reproduce this. In fact, it crashes for all the PDB codes > I tried, did you only try this one, or others as well, and what were > your observations? > > I have forwarded the bug upstream.
Turns out this is an OpenBabel bug after all. It has been fixed upstream in trunk (to-be openbabel-2.3) with commit r3601, unfortunately, the 2.2 code is different at this place. So a backport is non-trivial (at least for me after looking at it for a minute); if somebody wants to take a look, be our guest. Michael -- To UNSUBSCRIBE, email to [email protected] with a subject of "unsubscribe". Trouble? Contact [email protected]
