Author: tille
Date: 2009-09-26 07:50:40 +0000 (Sat, 26 Sep 2009)
New Revision: 4032
Added:
trunk/packages/infernal/trunk/debian/infernal.install
Modified:
trunk/packages/infernal/trunk/debian/changelog
trunk/packages/infernal/trunk/debian/rules
Log:
Rewritten debian/rules to short dh version; install src/{trcyk,truncyk_check}
to /usr/bin - Steffen, could you please comment on this whether leaving these
binaries out or are they new?
Modified: trunk/packages/infernal/trunk/debian/changelog
===================================================================
--- trunk/packages/infernal/trunk/debian/changelog 2009-09-26 07:05:38 UTC
(rev 4031)
+++ trunk/packages/infernal/trunk/debian/changelog 2009-09-26 07:50:40 UTC
(rev 4032)
@@ -11,7 +11,7 @@
- s/Debian-Med/Debian Med/
- Build-Depends: debhelper (>= 7.1) autotools-dev
- Package: infernal-doc
- * debian/rules: removed deprecated -k option from dh_clean
+ * debian/rules rewritten to make use of short dh
* debian/copyright:
- added myself to Copyright holders of debian/*
- squid is not part of the upstream tarball anymore so this
@@ -19,6 +19,8 @@
- files/Userguide.pdf: Copied comment about PDF = source from
README.Debian
* debian/infernal-doc.doc-base
+ * debian/infernal.install: install src/{trcyk,truncyk_check} to
+ /usr/bin
-- Andreas Tille <[email protected]> Fri, 25 Sep 2009 15:17:22 +0200
Added: trunk/packages/infernal/trunk/debian/infernal.install
===================================================================
--- trunk/packages/infernal/trunk/debian/infernal.install
(rev 0)
+++ trunk/packages/infernal/trunk/debian/infernal.install 2009-09-26
07:50:40 UTC (rev 4032)
@@ -0,0 +1,3 @@
+src/trcyk usr/bin
+src/truncyk_check usr/bin
+
Modified: trunk/packages/infernal/trunk/debian/rules
===================================================================
--- trunk/packages/infernal/trunk/debian/rules 2009-09-26 07:05:38 UTC (rev
4031)
+++ trunk/packages/infernal/trunk/debian/rules 2009-09-26 07:50:40 UTC (rev
4032)
@@ -1,146 +1,17 @@
#!/usr/bin/make -f
# -*- makefile -*-
-# Sample debian/rules that uses debhelper.
-#
-# This file was originally written by Joey Hess and Craig Small.
-# As a special exception, when this file is copied by dh-make into a
-# dh-make output file, you may use that output file without restriction.
-# This special exception was added by Craig Small in version 0.37 of dh-make.
-#
-# Modified to make a template file for a multi-binary package with separated
-# build-arch and build-indep targets by Bill Allombert 2001
-# Uncomment this to turn on verbose mode.
-#export DH_VERBOSE=1
+%:
+ dh $@
-# This has to be exported to make some magic below work.
-export DH_OPTIONS
-
-# These are used for cross-compiling and for saving the configure script
-# from having to guess our platform (since we know it already)
-DEB_HOST_GNU_TYPE ?= $(shell dpkg-architecture -qDEB_HOST_GNU_TYPE)
-DEB_BUILD_GNU_TYPE ?= $(shell dpkg-architecture -qDEB_BUILD_GNU_TYPE)
-
-
-CFLAGS = -Wall -g
-
-ifneq (,$(findstring noopt,$(DEB_BUILD_OPTIONS)))
- CFLAGS += -O0
-else
- CFLAGS += -O2
-endif
-
-config.status: configure
- dh_testdir
- # Add here commands to configure the package.
-ifneq "$(wildcard /usr/share/misc/config.sub)" ""
- cp -f /usr/share/misc/config.sub config.sub
-endif
-ifneq "$(wildcard /usr/share/misc/config.guess)" ""
- cp -f /usr/share/misc/config.guess config.guess
-endif
- ./configure --host=$(DEB_HOST_GNU_TYPE) --build=$(DEB_BUILD_GNU_TYPE)
--prefix=/usr --pdfdir=\$${prefix}/share/doc/infernal
--mandir=\$${prefix}/share/man --infodir=\$${prefix}/share/info
CFLAGS="$(CFLAGS)" LDFLAGS="-Wl,-z,defs"
-
-
-#Architecture
-build: build-arch build-indep
-
-build-arch: build-arch-stamp
-build-arch-stamp: config.status
-
- # Add here commands to compile the arch part of the package.
- $(MAKE)
- touch $@
-
-build-indep: build-indep-stamp
-build-indep-stamp: config.status
- # Add here commands to compile the indep part of the package.
- #$(MAKE) doc
- touch $@
-
-clean:
- dh_testdir
- dh_testroot
- rm -f build-arch-stamp build-indep-stamp #CONFIGURE-STAMP#
- # Add here commands to clean up after the build process.
+override_dh_auto_clean:
if [ -r Makefile ]; then $(MAKE) distclean; fi
- rm -f config.sub config.guess
- dh_clean cm*.1 */*.log *.log */Makefile Makefile
documentation/manpages/*.1
+ dh_clean *.1 */*.log *.log */Makefile Makefile
documentation/manpages/*.1
-install: install-indep install-arch
-install-indep:
- #dh_testdir
- #dh_testroot
- #dh_clean -i
- #dh_installdirs -i
- # Add here commands to install the indep part of the package into
- # debian/<package>-doc.
- #INSTALLDOC#
- #dh_install -i
+override_dh_auto_install:
+ $(MAKE) install PREFIX=`pwd`/debian/tmp
-cm2hmm.1:
- for i in documentation/manpages/*.man ; \
- do \
- m=`basename $$i .man`.1 ; \
- cp $$i $$m; \
- done
-
-install-arch: cm2hmm.1
- dh_testdir
- dh_testroot
- dh_clean -s
- dh_installdirs -s
-
- # Add here commands to install the arch part of the package into
- # debian/tmp.
- $(MAKE) prefix=$(CURDIR)/debian/infernal/usr install
-
- dh_install -s
-# Must not depend on anything. This is to be called by
-# binary-arch/binary-indep
-# in another 'make' thread.
-binary-common:
- dh_testdir
- dh_testroot
- dh_installchangelogs
- dh_installdocs
- dh_installexamples intro
- dh_installman *.1
- dh_link
- dh_strip
- dh_compress
- dh_fixperms
-# dh_perl
- dh_makeshlibs
- dh_installdeb
- dh_shlibdeps
- dh_gencontrol
- dh_md5sums
- dh_builddeb
-
-# Build architecture independant packages using the common target.
-binary-indep: build-indep install-indep
- #$(MAKE) -f debian/rules DH_OPTIONS=-i binary-common
-
-# Build architecture dependant packages using the common target.
-binary-arch: build-arch install-arch
- $(MAKE) -f debian/rules DH_OPTIONS=-s binary-common
-
get-orig-source:
- VERSION=`head -1 debian/changelog | cut -f1 -d- | cut -f2 -d\( | tr -d
'\n'` ; \
- URL="ftp://selab.janelia.org/pub/software/infernal/infernal.tar.gz";; \
- cd ..; \
- wget -nc $$URL && tar xzvf infernal.tar.gz; \
- p=`pwd`; \
- if [ -d infernal-$$VERSION ]; then \
- cd infernal-$$VERSION && rm -rf ./easel/documentation
Userguide.pdf ; \
- else \
- echo "Please check debian/changelog, the version you have
downloaded is apparently newer than expected." ; \
- exit -1 ; \
- fi; \
- cd $$p ; \
- tar czvf infernal_$${VERSION}.orig.tar.gz infernal-$$VERSION && rm -rf
infernal-$$VERSION
-
-
-binary: binary-arch
-.PHONY: build clean binary-indep binary-arch binary install install-indep
install-arch
+ VERSION=`dpkg-parsechangelog | grep Ver | cut -d' ' -f2 | cut -d- -f1`
; \
+
URL="ftp://selab.janelia.org/pub/software/infernal/infernal-$${VERSION}.tar.gz";;
\
+ ln -s infernal-$${VERSION}.tar.gz infernal_$${VERSION}.orig.tar.gz
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