Author: tille
Date: 2011-02-04 09:58:06 +0000 (Fri, 04 Feb 2011)
New Revision: 5882
Added:
trunk/packages/mrbayes/trunk/debian/mb-mpi
Modified:
trunk/packages/mrbayes/trunk/debian/control
trunk/packages/mrbayes/trunk/debian/mrbayes-mpi.install
trunk/packages/mrbayes/trunk/debian/rules
Log:
For mb-mpi we need a wrapper executing orterun to call the executable
Modified: trunk/packages/mrbayes/trunk/debian/control
===================================================================
--- trunk/packages/mrbayes/trunk/debian/control 2011-02-04 07:48:59 UTC (rev
5881)
+++ trunk/packages/mrbayes/trunk/debian/control 2011-02-04 09:58:06 UTC (rev
5882)
@@ -29,7 +29,7 @@
Package: mrbayes-mpi
Architecture: any
-Depends: ${shlibs:Depends}, ${misc:Depends}, openmpi-common
+Depends: ${shlibs:Depends}, ${misc:Depends}, openmpi-common, openmpi-bin
Suggests: mpi-default
Description: Bayesian Inference of Phylogeny - mpi version
Bayesian inference of phylogeny is based upon a quantity called the posterior
Added: trunk/packages/mrbayes/trunk/debian/mb-mpi
===================================================================
--- trunk/packages/mrbayes/trunk/debian/mb-mpi (rev 0)
+++ trunk/packages/mrbayes/trunk/debian/mb-mpi 2011-02-04 09:58:06 UTC (rev
5882)
@@ -0,0 +1,3 @@
+#!/bin/sh
+# PATH="/usr/lib/mrbayes-mpi:$PATH"
+orterun /usr/lib/mrbayes-mpi/mb-mpi $@
Modified: trunk/packages/mrbayes/trunk/debian/mrbayes-mpi.install
===================================================================
--- trunk/packages/mrbayes/trunk/debian/mrbayes-mpi.install 2011-02-04
07:48:59 UTC (rev 5881)
+++ trunk/packages/mrbayes/trunk/debian/mrbayes-mpi.install 2011-02-04
09:58:06 UTC (rev 5882)
@@ -1 +1,2 @@
-mb-mpi usr/bin
+mb-mpi usr/lib/mrbayes-mpi
+debian/mb-mpi usr/bin
Modified: trunk/packages/mrbayes/trunk/debian/rules
===================================================================
--- trunk/packages/mrbayes/trunk/debian/rules 2011-02-04 07:48:59 UTC (rev
5881)
+++ trunk/packages/mrbayes/trunk/debian/rules 2011-02-04 09:58:06 UTC (rev
5882)
@@ -6,9 +6,6 @@
# Uncomment this to turn on verbose mode.
#export DH_VERBOSE=1
-mpipkg=mrbayes-mpi
-mpibin=mb-mpi
-
%:
dh $@
@@ -22,6 +19,7 @@
mv mb mb-mpi
# build mb
- # $(MAKE) clean # <-- seems to delete mb-mpi somehow
+ # $(MAKE) clean # <-- seems to delete mb-mpi somehow, so rm *.o files
manually
rm -f *.o
MPI=no LIBS="-Wl,--as-needed" $(MAKE)
+
_______________________________________________
debian-med-commit mailing list
[email protected]
http://lists.alioth.debian.org/mailman/listinfo/debian-med-commit
