Author: osallou-guest Date: 2011-05-03 06:25:44 +0000 (Tue, 03 May 2011) New Revision: 6752
Modified: trunk/packages/ncbi-blast-plus/trunk/debian/patches/fix_checks trunk/packages/ncbi-blast-plus/trunk/debian/patches/fix_gcc46_include_error Log: headers update, apply patch from upstream for gcc 4.6 Modified: trunk/packages/ncbi-blast-plus/trunk/debian/patches/fix_checks =================================================================== --- trunk/packages/ncbi-blast-plus/trunk/debian/patches/fix_checks 2011-05-02 17:09:20 UTC (rev 6751) +++ trunk/packages/ncbi-blast-plus/trunk/debian/patches/fix_checks 2011-05-03 06:25:44 UTC (rev 6752) @@ -1,3 +1,9 @@ +Subject: command time not found when using shell + + * scripts/common/check/check_make_unix.sh: use bash and remove exec usage + +Author: Olivier Sallou <[email protected]> +Last-Update: 2011-05-03 --- a/scripts/common/check/check_make_unix.sh +++ b/scripts/common/check/check_make_unix.sh @@ -503,8 +503,8 @@ Modified: trunk/packages/ncbi-blast-plus/trunk/debian/patches/fix_gcc46_include_error =================================================================== --- trunk/packages/ncbi-blast-plus/trunk/debian/patches/fix_gcc46_include_error 2011-05-02 17:09:20 UTC (rev 6751) +++ trunk/packages/ncbi-blast-plus/trunk/debian/patches/fix_gcc46_include_error 2011-05-03 06:25:44 UTC (rev 6752) @@ -1,10 +1,16 @@ ---- a/src/corelib/ncbi_stack_linux.cpp -+++ b/src/corelib/ncbi_stack_linux.cpp -@@ -32,6 +32,7 @@ - #include <ncbi_pch.hpp> - #include <execinfo.h> - #if NCBI_COMPILER_VERSION >= 310 -+# include<stddef.h> - # include <cxxabi.h> - #endif - #include <vector> +Subject: GCC 4.6 compilation error due to missing def + + * include/corelib/ncbistre.hpp: Add stddef definition required by gcc4.6 + +Author: Olivier Sallou <[email protected]> +Last-Update: 2011-05-03 +--- a/include/corelib/ncbistre.hpp ++++ b/include/corelib/ncbistre.hpp +@@ -116,6 +116,7 @@ + #define SEEKOFF PUBSEEKOFF + + #include <string> ++#include <stddef.h> + + + // (BEGIN_NCBI_SCOPE must be followed by END_NCBI_SCOPE later in this file) _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/mailman/listinfo/debian-med-commit
