Author: tille
Date: 2011-11-29 08:13:31 +0000 (Tue, 29 Nov 2011)
New Revision: 8691
Added:
trunk/packages/qiime/branches/lucid/debian/patches/fix_binary_helper_location.patch
Log:
Added patch which was obviosely forgotten to commit by Tim
Added:
trunk/packages/qiime/branches/lucid/debian/patches/fix_binary_helper_location.patch
===================================================================
---
trunk/packages/qiime/branches/lucid/debian/patches/fix_binary_helper_location.patch
(rev 0)
+++
trunk/packages/qiime/branches/lucid/debian/patches/fix_binary_helper_location.patch
2011-11-29 08:13:31 UTC (rev 8691)
@@ -0,0 +1,18 @@
+--- a/qiime/denoiser/utils.py
++++ b/qiime/denoiser/utils.py
+@@ -41,9 +41,12 @@
+ def get_flowgram_ali_exe():
+ """Return the path to the flowgram alignment prog
+ """
+- fp = get_qiime_project_dir() +\
+- "/qiime/support_files/denoiser/bin/FlowgramAli_4frame"
+- return fp
++ """fp = get_qiime_project_dir() +\
++ """ "/qiime/support_files/denoiser/bin/FlowgramAli_4frame"
++
++ """ Modified for Debian to allow this file to live somewhere more
sensible:
++ """
++ return "/usr/lib/qiime/support_files/denoiser/bin/FlowgramAli_4frame"
+
+ def check_flowgram_ali_exe():
+ """Check if we have a working FlowgramAligner"""
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