Pierre Gruet pushed to branch upstream at Debian Med / picard-tools
Commits: 02c98cce by Pierre Gruet at 2021-11-17T21:47:04+01:00 New upstream version 2.26.5+dfsg - - - - - 35fe7b68 by Pierre Gruet at 2021-11-27T20:58:10+01:00 New upstream version 2.26.6+dfsg - - - - - 30 changed files: - + .github/workflows/trivy.yml - .travis.yml - Dockerfile - LICENSE.txt - README.md - build.gradle - build_push_docker.sh - + scripts/travis/check_for_pull_request - src/main/java/picard/analysis/AlignmentSummaryMetrics.java - src/main/java/picard/analysis/AlignmentSummaryMetricsCollector.java - src/main/java/picard/analysis/CollectAlignmentSummaryMetrics.java - src/main/java/picard/analysis/CollectBaseDistributionByCycle.java - src/main/java/picard/analysis/CollectGcBiasMetrics.java - src/main/java/picard/analysis/CollectInsertSizeMetrics.java - src/main/java/picard/analysis/CollectJumpingLibraryMetrics.java - src/main/java/picard/analysis/CollectOxoGMetrics.java - src/main/java/picard/analysis/CollectQualityYieldMetrics.java - src/main/java/picard/analysis/CollectRnaSeqMetrics.java - src/main/java/picard/analysis/CollectRrbsMetrics.java - src/main/java/picard/analysis/CollectWgsMetrics.java - src/main/java/picard/analysis/CollectWgsMetricsWithNonZeroCoverage.java - src/main/java/picard/analysis/MeanQualityByCycle.java - src/main/java/picard/analysis/QualityScoreDistribution.java - src/main/java/picard/analysis/RnaSeqMetrics.java - src/main/java/picard/analysis/SinglePassSamProgram.java - src/main/java/picard/analysis/directed/CollectTargetedMetrics.java - src/main/java/picard/analysis/directed/RnaSeqMetricsCollector.java - src/main/java/picard/analysis/replicates/CollectIndependentReplicateMetrics.java - src/main/java/picard/annotation/RefFlatReader.java - + src/main/java/picard/annotation/SortGff.java The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/picard-tools/-/compare/83ec790bdd93a561288ad0fc1230b3773777ad85...35fe7b686c72df9c0e8e46f952bc58ac82a13f97 -- View it on GitLab: https://salsa.debian.org/med-team/picard-tools/-/compare/83ec790bdd93a561288ad0fc1230b3773777ad85...35fe7b686c72df9c0e8e46f952bc58ac82a13f97 You're receiving this email because of your account on salsa.debian.org.
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