Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
d6c97e48 by Andreas Tille at 2022-01-24T13:42:22+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,46 +1,47 @@
-Last-Update: Mon, 24 Jan 2022 01:42:03 +0000
+Last-Update: Mon, 24 Jan 2022 13:42:04 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 183 | {covid-19,imaging}
|
- orthanc | 106 | {imaging,covid-19,practice}
|
- orthanc-wsi | 56 |
{practice,laboratory,covid-19,imaging,his,oncology} |
- htsjdk | 32 | {bio-dev}
|
- dicom3tools | 29 | {imaging}
|
- dicomscope | 29 | {imaging}
|
- amide | 28 | {imaging}
|
- dcm2niix | 22 | {imaging}
|
+ dcmtk | 181 | {covid-19,imaging}
|
+ orthanc | 105 | {imaging,covid-19,practice}
|
+ orthanc-wsi | 57 |
{practice,laboratory,covid-19,imaging,his,oncology} |
+ htsjdk | 33 | {bio-dev}
|
+ amide | 29 | {imaging}
|
+ dicom3tools | 28 | {imaging}
|
+ dicomscope | 28 | {imaging}
|
+ dcm2niix | 21 | {imaging}
|
orthanc-webviewer | 20 | {imaging}
|
- invesalius | 16 | {imaging}
|
+ invesalius | 15 | {imaging}
|
gnumed-server | 14 | {practice,covid-19}
|
- gdcm | 13 | {covid-19,imaging}
|
+ ngs-sdk | 14 | {bio-dev}
|
+ gdcm | 12 | {covid-19,imaging}
|
gdcm | 12 | {imaging-dev}
|
- minc-tools | 12 | {imaging}
|
- ngs-sdk | 12 | {bio-dev}
|
- adun.app | 11 | {bio}
|
- openslide | 10 | {imaging}
|
- dicomnifti | 9 | {imaging}
|
- lagan | 9 | {bio}
|
- mia | 9 | {imaging}
|
+ minc-tools | 11 | {imaging}
|
+ adun.app | 10 | {bio}
|
+ lagan | 10 | {bio}
|
ngs-sdk | 9 | {bio-dev}
|
nifti2dicom | 9 | {imaging}
|
+ openslide | 9 | {imaging}
|
orthanc-dicomweb | 9 | {imaging,covid-19}
|
- pixelmed | 9 | {imaging}
|
biojava-live | 8 | {bio-dev}
|
+ dicomnifti | 8 | {imaging}
|
+ mia | 8 | {imaging}
|
mrtrix3 | 8 | {imaging}
|
- nifticlib | 8 | {imaging}
|
orthanc-postgresql | 8 | {imaging}
|
- plastimatch | 8 | {imaging}
|
+ pixelmed | 8 | {imaging}
|
libminc | 7 | {imaging-dev}
|
nifti2dicom | 7 | {imaging}
|
nifticlib | 7 | {imaging-dev}
|
+ nifticlib | 7 | {imaging}
|
+ plastimatch | 7 | {imaging}
|
libncl | 6 | {bio}
|
librg-utils-perl | 6 | {bio}
|
+ ngs-sdk | 6 | {bio-dev}
|
obitools | 6 | {bio}
|
- openslide | 6 | {imaging-dev}
|
dicompyler | 5 | {oncology}
|
jebl2 | 5 | {bio-dev}
|
nipype | 5 | {imaging-dev,imaging}
|
+ openslide | 5 | {imaging-dev}
|
orthanc-mysql | 5 | {imaging}
|
salmon | 5 | {bio,covid-19}
|
treeview | 5 | {bio-phylogeny,bio}
|
@@ -50,10 +51,10 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000
embassy-domalign | 4 | {cloud,bio}
|
getdata | 4 | {bio}
|
ghmm | 4 | {bio}
|
+ jellyfish1 | 4 | {bio}
|
king | 4 | {typesetting,imaging}
|
libdivsufsort | 4 | {bio-dev}
|
melting | 4 | {bio,cloud}
|
- ngs-sdk | 4 | {bio-dev}
|
pymia | 4 | {imaging-dev}
|
spread-phy | 4 | {bio-phylogeny,bio}
|
staden | 4 | {bio}
|
@@ -65,15 +66,15 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000
bitseq | 3 | {bio}
|
blimps | 3 | {bio}
|
brig | 3 | {bio}
|
+ canu | 3 | {bio}
|
clonalorigin | 3 | {bio}
|
embassy-domainatrix | 3 | {bio,cloud}
|
fastml | 3 | {bio}
|
- jellyfish1 | 3 | {bio}
|
lamarc | 3 | {bio}
|
libsbml | 3 | {bio-dev}
|
+ mhap | 3 | {bio-ngs,bio}
|
orthanc-gdcm | 3 | {imaging}
|
orthanc-python | 3 | {covid-19}
|
- oscar | 3 | {data,tools,practice}
|
phyutility | 3 | {bio,cloud}
|
piler | 3 | {bio}
|
pscan-chip | 3 | {bio}
|
@@ -87,11 +88,11 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000
tvc | 3 | {bio}
|
zalign | 3 | {cloud,bio}
|
biomaj3-cli | 2 | {cloud}
|
- canu | 2 | {bio}
|
cat-bat | 2 | {bio,covid-19}
|
clonalframeml | 2 | {covid-19,bio}
|
cmtk | 2 | {imaging}
|
delly | 2 | {covid-19,bio}
|
+ dextractor | 2 | {bio,covid-19}
|
embassy-domsearch | 2 | {cloud,bio}
|
gatb-core | 2 | {bio}
|
hinge | 2 | {bio}
|
@@ -102,7 +103,7 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000
librdp-taxonomy-tree-java | 2 | {bio-dev}
|
mauve-aligner | 2 | {bio}
|
metaphlan2 | 2 | {bio}
|
- mhap | 2 | {bio-ngs,bio}
|
+ oscar | 2 | {data,tools,practice}
|
placnet | 2 | {bio}
|
plasmidseeker | 2 | {bio}
|
proalign | 2 | {bio,bio-phylogeny}
|
@@ -121,7 +122,6 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000
trace2dbest | 2 | {bio}
|
atropos | 1 | {bio}
|
cufflinks | 1 | {bio,cloud}
|
- dextractor | 1 | {bio,covid-19}
|
emmax | 1 | {bio}
|
kmerresistance | 1 | {bio}
|
libgenome | 1 | {bio-dev}
|
@@ -202,9 +202,10 @@ Last-Update: Mon, 24 Jan 2022 01:42:03 +0000
sight | 0 | {imaging-dev}
|
simpleitk | 0 | {imaging-dev}
|
smrtanalysis | 0 | {covid-19,bio}
|
+ snpeff | 0 | {bio,covid-19}
|
tipp | 0 | {bio,covid-19}
|
varna | 0 | {bio}
|
xdffileio | 0 | {imaging-dev}
|
xxsds-dynamic | 0 | {bio-dev}
|
-(234 rows)
+(235 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d6c97e48abd0397fe05a178ada1aa12ee7e43d85
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d6c97e48abd0397fe05a178ada1aa12ee7e43d85
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