Andreas Tille pushed to branch upstream at Debian Med / trinityrnaseq
Commits: 8f062390 by Andreas Tille at 2023-01-21T12:04:55+01:00 New upstream version 2.15.0+dfsg - - - - - 30 changed files: - Analysis/SuperTranscripts/DTU/dexseq_wrapper.pl - Changelog.txt - Chrysalis/analysis/ReadsToTranscripts.cc - Docker/Dockerfile - Docker/VERSION.txt - PerlLib/SAM_entry.pm - Trinity - + sample_data/test_Trinity_Assembly/misc_run_tests/__runMe_using_Grid_uger.HpcGridRunner.singularity_intra.sh - + sample_data/test_Trinity_Assembly/misc_run_tests/__test_runMe_singularity.intra.sh - sample_data/test_Trinity_Assembly/runMe.sh - trinity-plugins/ParaFly/Makefile - trinity-plugins/ParaFly/config.log - trinity-plugins/ParaFly/config.status - trinity-plugins/ParaFly/src/Makefile - trinity-plugins/bamsifter/build_htslib.sh - trinity-plugins/bamsifter/sift_bam_max_cov.cpp - trinity_ext_sample_data/test_Assembly_DiffReadFormattings/Makefile - trinity_ext_sample_data/test_Assembly_DiffReadFormattings/ensure_min_asm.pl - trinity_ext_sample_data/test_GenomeGuidedTrinity/run_Schizo_TrinityGG_jaccard_clip.sh - trinity_ext_sample_data/test_GenomeGuidedTrinity/run_chr17_GG_wLongreads.sh - trinity_ext_sample_data/test_GenomeGuidedTrinity/run_genome-guided_Trinity_use_existing_bam.sh - trinity_ext_sample_data/test_GenomeGuidedTrinity/run_small_GG_mutliScaff_test.sh - trinity_ext_sample_data/test_full_edgeR_pipeline/Makefile - util/insilico_read_normalization.pl - + util/misc/SAM_to_gff3.minimap2.pl - + util/misc/STAR_align_log_parser.py - util/misc/TPM_weighted_gene_length.py - + util/misc/fasta_to_tab.pl - util/misc/process_minimap2_alignments.pl - + util/misc/rename_fasta_accessions_using_Trinotate_annot_mappings.pl The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/trinityrnaseq/-/commit/8f062390ba66b192c30c5968d1cbbbe34d5d3adb -- View it on GitLab: https://salsa.debian.org/med-team/trinityrnaseq/-/commit/8f062390ba66b192c30c5968d1cbbbe34d5d3adb You're receiving this email because of your account on salsa.debian.org.
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