Author: tille
Date: 2012-05-29 12:29:49 +0000 (Tue, 29 May 2012)
New Revision: 11069
Added:
trunk/packages/ray-denovoassembler/
trunk/packages/ray-denovoassembler/trunk/
trunk/packages/ray-denovoassembler/trunk/debian/
trunk/packages/ray-denovoassembler/trunk/debian/changelog
trunk/packages/ray-denovoassembler/trunk/debian/compat
trunk/packages/ray-denovoassembler/trunk/debian/control
trunk/packages/ray-denovoassembler/trunk/debian/copyright
trunk/packages/ray-denovoassembler/trunk/debian/rules
trunk/packages/ray-denovoassembler/trunk/debian/upstream
Log:
Inject data from task file into SVN machine readable files
Added: trunk/packages/ray-denovoassembler/trunk/debian/changelog
===================================================================
--- trunk/packages/ray-denovoassembler/trunk/debian/changelog
(rev 0)
+++ trunk/packages/ray-denovoassembler/trunk/debian/changelog 2012-05-29
12:29:49 UTC (rev 11069)
@@ -0,0 +1,5 @@
+ray-denovoassembler (2.0.0-rc7-1) unstable; urgency=low
+
+ * Initial release
+
+ -- Andreas Tille <[email protected]> Tue, 29 May 2012 14:23:29 +0200
Added: trunk/packages/ray-denovoassembler/trunk/debian/compat
===================================================================
--- trunk/packages/ray-denovoassembler/trunk/debian/compat
(rev 0)
+++ trunk/packages/ray-denovoassembler/trunk/debian/compat 2012-05-29
12:29:49 UTC (rev 11069)
@@ -0,0 +1 @@
+9
Added: trunk/packages/ray-denovoassembler/trunk/debian/control
===================================================================
--- trunk/packages/ray-denovoassembler/trunk/debian/control
(rev 0)
+++ trunk/packages/ray-denovoassembler/trunk/debian/control 2012-05-29
12:29:49 UTC (rev 11069)
@@ -0,0 +1,19 @@
+Source: ray-denovoassembler
+Section: science
+Priority: optional
+Maintainer: Debian Med Packaging Team
<[email protected]>
+DM-Upload-Allowed: yes
+Uploaders: Andreas Tille <[email protected]>
+Build-Depends: debhelper (>= 9)
+Standards-Version: 3.9.3
+Homepage: http://sourceforge.net/projects/denovoassembler/
+Vcs-Browser:
http://svn.debian.org/wsvn/debian-med/trunk/packages/ray-denovoassembler/trunk/
+Vcs-Svn:
svn://svn.debian.org/debian-med/trunk/packages/ray-denovoassembler/trunk/
+
+Package: ray-denovoassembler
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}
+Description: computes de novo genome assemblies of next-gen sequencing data
+ Ray is a paralleled computer-controlled software that computes de novo
+ genome assemblies of next-gen sequencing data using message passing
+ interface.
Added: trunk/packages/ray-denovoassembler/trunk/debian/copyright
===================================================================
--- trunk/packages/ray-denovoassembler/trunk/debian/copyright
(rev 0)
+++ trunk/packages/ray-denovoassembler/trunk/debian/copyright 2012-05-29
12:29:49 UTC (rev 11069)
@@ -0,0 +1,11 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: Ray
+Source: http://sourceforge.net/projects/denovoassembler/files/
+
+Files: *
+Copyright: © 2010-2012 Sébastien Boisvert
+License: GPLv3
+
+Files: debian/*
+Copyright: © 2012 Andreas Tille <[email protected]>
+License: GPLv3
Added: trunk/packages/ray-denovoassembler/trunk/debian/rules
===================================================================
--- trunk/packages/ray-denovoassembler/trunk/debian/rules
(rev 0)
+++ trunk/packages/ray-denovoassembler/trunk/debian/rules 2012-05-29
12:29:49 UTC (rev 11069)
@@ -0,0 +1,6 @@
+#!/usr/bin/make -f
+
+# DH_VERBOSE := 1
+
+%:
+ dh $@
Property changes on: trunk/packages/ray-denovoassembler/trunk/debian/rules
___________________________________________________________________
Added: svn:executable
+ *
Added: trunk/packages/ray-denovoassembler/trunk/debian/upstream
===================================================================
--- trunk/packages/ray-denovoassembler/trunk/debian/upstream
(rev 0)
+++ trunk/packages/ray-denovoassembler/trunk/debian/upstream 2012-05-29
12:29:49 UTC (rev 11069)
@@ -0,0 +1,12 @@
+Reference:
+ Author: Sébastien Boisvert and François Laviolette and Jacques Corbeil
+ Title: "Ray: Simultaneous Assembly of Reads from a Mix of High-Throughput
Sequencing Technologies"
+ Journal: Journal of Computational Biology
+ Year: 2010
+ Volume: 17
+ Number: 11
+ Pages: 1519-1533
+ DOI: 10.1089/cmb.2009.0238
+ PMID: 20958248
+ URL: http://online.liebertpub.com/doi/abs/10.1089/cmb.2009.0238
+ eprint: http://online.liebertpub.com/doi/pdfplus/10.1089/cmb.2009.0238
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