Author: tille
Date: 2013-06-07 07:45:19 +0000 (Fri, 07 Jun 2013)
New Revision: 13866
Modified:
trunk/packages/mira/trunk/debian/changelog
trunk/packages/mira/trunk/debian/control
Log:
The actual scripts do not contain the .tcl suffix in our installation
Modified: trunk/packages/mira/trunk/debian/changelog
===================================================================
--- trunk/packages/mira/trunk/debian/changelog 2013-06-07 07:37:38 UTC (rev
13865)
+++ trunk/packages/mira/trunk/debian/changelog 2013-06-07 07:45:19 UTC (rev
13866)
@@ -25,6 +25,8 @@
fasta2frag.1, fastaselect.1, fastatool.1}:
Wrote manpage for some programs
* Removed debian/obsolete.mira-assembler.install
+ * debian/control: The actual scripts do not contain the .tcl suffix
+ in our installation
-- Andreas Tille <[email protected]> Fri, 07 Jun 2013 08:34:21 +0200
Modified: trunk/packages/mira/trunk/debian/control
===================================================================
--- trunk/packages/mira/trunk/debian/control 2013-06-07 07:37:38 UTC (rev
13865)
+++ trunk/packages/mira/trunk/debian/control 2013-06-07 07:45:19 UTC (rev
13866)
@@ -54,14 +54,14 @@
* fastatool: set of tools useful when working with FASTA trace files
.
Scripts provided:
- * fasta2frag.tcl: fragmenting sequences into smaller, overlapping
+ * fasta2frag: fragmenting sequences into smaller, overlapping
subsequences. Useful for simulating shotgun sequences. Can create
subsequences in both directions (/default) and also paired-end sequences.
- * fastaselect.tcl: given a FASTA file (and possibly a FASTA quality file) and
+ * fastaselect: given a FASTA file (and possibly a FASTA quality file) and
a file with names of reads, select the sequences from the input FASTA (and
quality file) and writes them to an output FASTA
- * fastqselect.tcl: like fastaselect.tcl, only for FASTQ
- * fixACE4consed.tcl: Consed has a bug which incapacitates it from reading
+ * fastqselect: like fastaselect, only for FASTQ
+ * fixACE4consed: Consed has a bug which incapacitates it from reading
consensus tags in ACE files written by the MIRA assembler (and possibly
other programs). This script massages an ACE file so that consed can read
the consensus tags.
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