Author: tille
Date: 2013-07-24 19:19:01 +0000 (Wed, 24 Jul 2013)
New Revision: 14226
Added:
trunk/packages/xmedcon/trunk/debian/patches/
trunk/packages/xmedcon/trunk/debian/patches/man-spelling.patch
trunk/packages/xmedcon/trunk/debian/patches/series
Modified:
trunk/packages/xmedcon/trunk/debian/changelog
Log:
Enhance manpages syntax and spelling
Modified: trunk/packages/xmedcon/trunk/debian/changelog
===================================================================
--- trunk/packages/xmedcon/trunk/debian/changelog 2013-07-24 19:17:08 UTC
(rev 14225)
+++ trunk/packages/xmedcon/trunk/debian/changelog 2013-07-24 19:19:01 UTC
(rev 14226)
@@ -17,6 +17,7 @@
* debian/watch: version=3
* debian/libmdc2-dev.install: Drop *.la file
Closes: #633237
+ * debian/man-spelling.patch: Enhance manpages syntax and spelling
-- Andreas Tille <[email protected]> Tue, 23 Jul 2013 08:46:18 +0200
Added: trunk/packages/xmedcon/trunk/debian/patches/man-spelling.patch
===================================================================
--- trunk/packages/xmedcon/trunk/debian/patches/man-spelling.patch
(rev 0)
+++ trunk/packages/xmedcon/trunk/debian/patches/man-spelling.patch
2013-07-24 19:19:01 UTC (rev 14226)
@@ -0,0 +1,654 @@
+Author: Andreas Tille <[email protected]>
+LastChanged: Tue, 23 Jul 2013 08:46:18 +0200
+Description: Fix some lintian issues with manpages
+
+--- xmedcon-0.13.0.orig/man/medcon.1
++++ xmedcon-0.13.0/man/medcon.1
+@@ -7,7 +7,7 @@
+ .in 0.2i
+ .HP 7
+ .B medcon
+-[options] -f files ...
++[options] \-f files ...
+ .PP
+ .br
+ .SH DESCRIPTION
+@@ -47,7 +47,7 @@
+ .PP
+ .in 0.2i
+ .TP
+-.B -f, --file, --files <files> ...
++.B \-f, \-\-file, \-\-files <files> ...
+ Read a list of files.
+
+ .SH OPTIONS
+@@ -55,87 +55,87 @@
+ .in 0.2i
+
+ .TP
+-.B -8, --indexed-color
+-This color mode forces 24-bit RGB color images being reduced to an 8-bit
indexed colormap. For color reduction in combination with dithering see the
-dith option.
++.B \-8, \-\-indexed\-color
++This color mode forces 24\-bit RGB color images being reduced to an 8-bit
indexed colormap. For color reduction in combination with dithering see the
\-dith option.
+
+ .TP
+-.B -24, --true-color
+-This color mode keeps a 24-bit image as is.
++.B \-24, \-\-true\-color
++This color mode keeps a 24\-bit image as is.
+
+ .TP
+-.B -alias, --alias-naming
++.B \-alias, \-\-alias\-naming
+ Generate filenames based on patient and study information. The syntax of the
resulting basename is:
+
+ <patient_name>+<study_id>+<study_date>+<study_time>
+ and
+ <series>+<acquisition>+<instance>
+
+-with the latter three id's applied in case the originating format is DICOM or
Acr/Nema. See also -noprefix. Since Analyze does not have a patient_name,
patient_id is used instead.
++with the latter three id's applied in case the originating format is DICOM or
Acr/Nema. See also \-noprefix. Since Analyze does not have a patient_name,
patient_id is used instead.
+
+ .TP
+-.B -anon, --anonymous
++.B \-anon, \-\-anonymous
+ Make patient and study related entries anonymous (filled with 'X'). This
option
+-can not be used with option -ident.
++can not be used with option \-ident.
+
+ .TP
+-.B -b8, --unsigned-char
++.B \-b8, \-\-unsigned\-char
+ .TP
+-.B -b16, --signed-short
++.B \-b16, \-\-signed\-short
+ .TP
+-.B -b16.12
+-Force writing of Uint8 or Int16 pixels. The special option -b16.12 only uses
12 bits, as unsigned however. With these options one can lose the quantified
float values when the new format doesn't support a global rescale factor or
slope/intercept.
++.B \-b16.12
++Force writing of Uint8 or Int16 pixels. The special option \-b16.12 only uses
12 bits, as unsigned however. With these options one can lose the quantified
float values when the new format doesn't support a global rescale factor or
slope/intercept.
+
+ .TP
+-.B -big, --big-endian
++.B \-big, \-\-big\-endian
+ Force writing of big endian files when supported by the format.
+
+ .TP
+-.B -byframe, --sort-by-frame
++.B \-byframe, \-\-sort\-by\-frame
+ Set sort order in ECAT by frames, instead of the default anatomical sort
(based on slice location). Identical planes in each frame will be grouped
together. You don't want this.
+
+ .TP
+-.B -c, --convert <format> ...
++.B \-c, \-\-convert <format> ...
+ Convert with a list of formats to convert to. Use the notation without quotes
as specified in the above table. You can not use this option with -p.
+
+ .TP
+-.B -contrast, --enable-contrast
+-Apply (DICOM) window centre/width contrast remapping. Although this may
improve the display of images, any manufacturer independent pixel values (like
HU, SUV) with quantitation options -qc or -qs will be lost.
++.B \-contrast, \-\-enable\-contrast
++Apply (DICOM) window centre/width contrast remapping. Although this may
improve the display of images, any manufacturer independent pixel values (like
HU, SUV) with quantitation options \-qc or \-qs will be lost.
+
+ .TP
+-.B -cor, --coronal
++.B \-cor, \-\-coronal
+ Reslice the images of a volume into a coronal projection while preserving the
real world dimensions.
+
+ .TP
+-.B -crop=<X>:<Y>:<W>:<H>, --crop-images=<X>:<Y>:<W>:<H>
+-This option allows to crop an equal frame from all images at <X>:<Y> where
width and height are <W>:<H>. The upper-left corner of an image is at 0:0.
++.B \-crop=<X>:<Y>:<W>:<H>, \-\-crop\-images=<X>:<Y>:<W>:<H>
++This option allows one to crop an equal frame from all images at <X>:<Y>
where width and height are <W>:<H>. The upper\-left corner of an image is at
0:0.
+
+ .TP
+-.B -cs, --cine-sorting
+-Apply cine sorting, 1st image of each time frame, 2nd image of each time
frame, 3rd image of each time frame, ... (applicable on gated SPECT).
Reapplying does NOT undo this sorting. For this you need option -cu.
++.B \-cs, \-\-cine\-sorting
++Apply cine sorting, 1st image of each time frame, 2nd image of each time
frame, 3rd image of each time frame, ... (applicable on gated SPECT).
Reapplying does NOT undo this sorting. For this you need option \-cu.
+
+ .TP
+-.B -cu, --cine-undo
+-Undo the cine sorting (as a result of the option -cs).
++.B \-cu, \-\-cine\-undo
++Undo the cine sorting (as a result of the option \-cs).
+
+ .TP
+-.B -cw=<centre>:<width>
+-Remap contrast using specified centre/width pair. No spaces are allowed
within this option. See also -contrast options.
++.B \-cw=<centre>:<width>
++Remap contrast using specified centre/width pair. No spaces are allowed
within this option. See also \-contrast options.
+
+ .TP
+-.B -d, --debug
++.B \-d, \-\-debug
+ Show debug info. After reading a file, the program will display
+ the contents of the internal FILEINFO structure.
+
+ .TP
+-.B -db
++.B \-db
+ Only print main header of CTI ECAT files to standard output.
+
+ .TP
+-.B -dith, --dither-color
+-Use dithering to improve quality of color reduction (from RGB to 8-bit
indexed).
++.B \-dith, \-\-dither\-color
++Use dithering to improve quality of color reduction (from RGB to 8\-bit
indexed).
+ .TP
+-.B -e, --extract [image ranges ...]
+-A routine to extract images interactively, unless you specify normal style
image ranges directly on the command-line separated by spaces. In normal style
it is also possible to reorder the sequence of images. You need to specify an
output conversion format (see option -c). Note that the extraction does NOT
addapt the centre-centre slice separations. In other words, proper volume
measurements could be lost.
++.B \-e, \-\-extract [image ranges ...]
++A routine to extract images interactively, unless you specify normal style
image ranges directly on the command-line separated by spaces. In normal style
it is also possible to reorder the sequence of images. You need to specify an
output conversion format (see option \-c). Note that the extraction does NOT
addapt the centre-centre slice separations. In other words, proper volume
measurements could be lost.
+ .PP
+ .ti +1.2i
+ Selection Type? 1=normal 2=ecat
+@@ -181,30 +181,30 @@
+ Give beds list?
+
+ .TP
+-.B -ean, --echo-alias-name
+-A convenience function which quickly echoes the alias or human readable
filename on screen, without any delay of image processing. For the syntax of
this alias filename, see option -alias. The output could then be used in a
script, for example to make interpretable links towards cryptic numbered files
resulting from a DICOM series.
++.B \-ean, \-\-echo\-alias\-name
++A convenience function which quickly echoes the alias or human readable
filename on screen, without any delay of image processing. For the syntax of
this alias filename, see option \-alias. The output could then be used in a
script, for example to make interpretable links towards cryptic numbered files
resulting from a DICOM series.
+
+ .TP
+-.B -fb-none, --without-fallback
++.B \-fb\-none, \-\-without\-fallback
+ .TP
+-.B -fb-anlz, --fallback-analyze
++.B \-fb\-anlz, \-\-fallback\-analyze
+ .TP
+-.B -fb-conc, --fallback-concorde
++.B \-fb\-conc, \-\-fallback\-concorde
+ .TP
+-.B -fb-dicom, --fallback-dicom
++.B \-fb\-dicom, \-\-fallback\-dicom
+ .TP
+-.B -fb-ecat, --fallback-ecat
++.B \-fb\-ecat, \-\-fallback\-ecat
+ Disable or specify a fallback read format in case autodetect failed.
+
+ .TP
+-.B -fh, --flip-horizontal
++.B \-fh, \-\-flip\-horizontal
+ .TP
+-.B -fv, --flip-vertical
+-Flip images horizontal (-fh) along the X-axis, vertical (-fv) along the
Y-axis respectively. Parameters such as slice orientation are NOT changed. See
also the -rs option.
++.B \-fv, \-\-flip\-vertical
++Flip images horizontal (\-fh) along the X\-axis, vertical (\-fv) along the
Y-axis respectively. Parameters such as slice orientation are NOT changed. See
also the \-rs option.
+
+ .TP
+-.B -fmosaic=<W>x<H>x<N>, --force-mosaic=<W>x<H>x<N>
+-Enforce the mosaic file support for DICOM or Acr/Nema formats. The *stamps*
will be splitted into separate slices according to the values supplied on the
command-line. See also extra options -interl and -mfixv. The preset arguments
are:
++.B \-fmosaic=<W>x<H>x<N>, \-\-force\-mosaic=<W>x<H>x<N>
++Enforce the mosaic file support for DICOM or Acr/Nema formats. The *stamps*
will be split into separate slices according to the values supplied on the
command-line. See also extra options \-interl and \-mfixv. The preset arguments
are:
+ .PP
+ .ti +1.2i
+ <W> = pixel width of image stamps (X)
+@@ -216,29 +216,29 @@
+ <N> = total number of image stamps (Z)
+ .PP
+ .ti +1.2i
+-.B medcon -f imagefile -fmosaic=64x64x30
++.B medcon \-f imagefile \-fmosaic=64x64x30
+
+ .TP
+-.B -g, --make-gray
++.B \-g, \-\-make\-gray
+ Remap coloured images to gray. This is necessary when you convert to formats
+ which only support a grayscale colormap!
+
+ .TP
+-.B -gap, --spacing-true-gap
++.B \-gap, \-\-spacing\-true\-gap
+ The spacing between slices is the true gap/overlap between adjacent slices.
In contrary to the default behaviour where the spacing between slices is
measured from the centre to centre of two adjacent slices (including
gap/overlap). Applied in DICOM & Acr/Nema.
+
+ .TP
+-.B -hackacr, --hack-acrtags
++.B \-hackacr, \-\-hack\-acrtags
+ Enables you to hack a file that contains Acr/Nema tags hidden somewhere.
+ Some proprietary image formats do contain tags but are placed after some
+ unknown headerinformation. This option will try to find some readable
+ tags in the first 2048 bytes after which it will give some possible hints
+ to get the images out of the file with the use of the interactive reading
+-procedure (see option `-i'). This experimental procedure can
++procedure (see option `\-i'). This experimental procedure can
+ fail badly ...
+
+ .TP
+-.B -i, --interactive
++.B \-i, \-\-interactive
+ Selects the interactive reading procedure. Normally the program automatically
+ detects the format or uses 'ecat' (or 'dicom') as default. With the
interactive procedure it could be possible to read an uncompressed, unsupported
format by answering the following questions:
+ .PP
+@@ -266,15 +266,15 @@
+ .ti +0.8i
+ Redo input?
+ .PP
+-The GUI allows to save such raw predef input (RPI) files, that can be used in
a redirect statement:
++The GUI allows one to save such raw predef input (RPI) files, that can be
used in a redirect statement:
+ .PP
+ .in 1.0i
+-.B medcon -f unsupported.img -c intf -i < predef.rpi
++.B medcon \-f unsupported.img \-c intf \-i < predef.rpi
+ .PP
+ Doing so you can create small scripts that will read and convert your
unsupported images at once.
+
+ .TP
+-.B -ident, --identify
++.B \-ident, \-\-identify
+ An interactive routine to specify the patient and study related information.
+ This option can not be used with the option -anon. The questions asked are:
+
+@@ -294,60 +294,60 @@
+ Give series description?
+
+ .TP
+-.B -implicit, --write-implicit
++.B \-implicit, \-\-write\-implicit
+ Another DICOM related option to enforce the implicit VR little transfer
+ syntax as output, instead of the default explicit transfer syntax.
+
+ .TP
+-.B -interl, --mosaic-interlaced
+-An extra option used in combination with forced mosaic (-fmosaic). The option
++.B \-interl, \-\-mosaic\-interlaced
++An extra option used in combination with forced mosaic (\-fmosaic). The
option
+ indicates that the slices in the original mosaic are in fact interlaced.
+-See also options -fmosaic and -mfixv.
++See also options \-fmosaic and \-mfixv.
+
+ .TP
+-.B -little, --little-endian
++.B \-little, \-\-little\-endian
+ Force writing of little endian files when supported by the format.
+
+ .TP
+-.B -lut, --load-lut <filename>
++.B \-lut, \-\-load\-lut <filename>
+ Load an external LUT color scheme.
+
+ .TP
+-.B -mh, --map-hotmetal
+-Selects the hotmetal colormap. This is only usefull to GIF89a or PNG.
++.B \-mh, \-\-map\-hotmetal
++Selects the hotmetal colormap. This is only useful to GIF89a or PNG.
+
+ .TP
+-.B -mr, --map-rainbow
+-Selects the rainbow colormap. This is only usefull to GIF89a or PNG.
++.B \-mr, \-\-map\-rainbow
++Selects the rainbow colormap. This is only useful to GIF89a or PNG.
+
+ .TP
+-.B -mc, --map-combined
+-Selects the combined colormap. This is only usefull to GIF89a or PNG.
++.B \-mc, \-\-map\-combined
++Selects the combined colormap. This is only useful to GIF89a or PNG.
+
+ .TP
+-.B -mi, --map-inverted
+-Selects the invers colormap. This is only usefull to GIF89a or PNG
++.B \-mi, \-\-map\-inverted
++Selects the invers colormap. This is only useful to GIF89a or PNG
+
+ .TP
+-.B -mfixv, --mosaic-fix-voxel
+-Another extra option used in combination with forced mosaic (-fmosaic).
Choosing
++.B \-mfixv, \-\-mosaic\-fix\-voxel
++Another extra option used in combination with forced mosaic (\-fmosaic).
Choosing
+ this options will rescale the real world voxel dimensions by the mosaic
factor.
+-See also -fmosaic and -interl.
++See also \-fmosaic and \-interl.
+
+ .TP
+-.B -mosaic, --enable-mosaic
+-Enable mosaic file support in DICOM or Acr/Nema format. The *stamps* will be
splitted into separate slices according to values found in the file. This
autodetect routine will always fix the voxel sizes. To support other type of
mosaic files, see option -fmosaic.
++.B \-mosaic, \-\-enable\-mosaic
++Enable mosaic file support in DICOM or Acr/Nema format. The *stamps* will be
splitted into separate slices according to values found in the file. This
autodetect routine will always fix the voxel sizes. To support other type of
mosaic files, see option \-fmosaic.
+
+ .TP
+-.B -n, --negatives
++.B \-n, \-\-negatives
+ Preserve negative values. When not selected, all negative
+-values are put to zero. In combination with quantitation (see -qs or -qc)
++values are put to zero. In combination with quantitation (see \-qs or \-qc)
+ the requested format must support pixels of type float, a global rescale
+ factor or the more generic slope/intercept concept in order to preserve
+ the (negative and positive) quantified values.
+
+ .TP
+-.B -nf, --norm-over-frames
++.B \-nf, \-\-norm\-over\-frames
+ Normalize with minimum/maximum values found over images in a frame group
+ (in case the original format has different frames). The default behaviour
+ is normalization with minimum/maximum values found over all images.
+@@ -356,27 +356,27 @@
+ to the new pixeltype boundaries based on the minimum/maximum values.
+
+ .TP
+-.B -nometa, --write-without-meta
++.B \-nometa, \-\-write\-without\-meta
+ Write DICOM files without the part 10 meta header (group 0x0002).
+
+ .TP
+-.B -nopath, --ignore-path
++.B \-nopath, \-\-ignore\-path
+ Ignore absolute path mentioned in the "name of data file" key of an interfile
header. Do make sure then that the data file resides in the same directory as
the header file.
+
+ .TP
+-.B -noprefix, --without-prefix
++.B \-noprefix, \-\-without\-prefix
+ This option disables the numbered prefix in the output filename. In
combination with the -alias option, one could create human readable and
alphabetical sorted files from DICOM or Acr/Name multiple file volumes.
+
+ .TP
+-.B -o, --output-name <filename>
++.B \-o, \-\-output\-name <filename>
+ Changes output filename for ALL files to be created. It is allowed to specify
a full directory path as well. However, a full path disables unique filename
prefixing.
+
+ .TP
+-.B -one, --single-file
++.B \-one, \-\-single\-file
+ Write header and image to same file; as allowed for InterFile.
+
+ .TP
+-.B -optgif, --options-gif
++.B \-optgif, \-\-options-gif
+ Define some GIF options when converting to the GIF format. Without this option
+ a loop and background color are defined by default. This interactive routine
+ asks the following questions:
+@@ -398,8 +398,8 @@
+ .in 0.2i
+
+ .TP
+-.B -optspm, --options-spm
+-Define some SPM options (origins) when converting to the Analyze format. The
quantification is not set. See also '-spm' & '-ar'. The interactive routine
asks the following questions:
++.B \-optspm, \-\-options\-spm
++Define some SPM options (origins) when converting to the Analyze format. The
quantification is not set. See also '\-spm' & '\-ar'. The interactive routine
asks the following questions:
+ .PP
+ .in 0.2i
+ .ti +0.8i
+@@ -411,8 +411,8 @@
+ .PP
+
+ .TP
+-.B -p, --print-values
+-Show some specified pixel values. This is an interactive routine. Calibration
and negative pixels are preserved automatically. You need to specify the -qs to
preserve the quantification instead of the calibration. You can not use this
option with -c. See also -pa option for a non-interactive routine.
++.B \-p, \-\-print-values
++Show some specified pixel values. This is an interactive routine. Calibration
and negative pixels are preserved automatically. You need to specify the \-qs
to preserve the quantification instead of the calibration. You can not use this
option with \-c. See also \-pa option for a non-interactive routine.
+ .PP
+ .in 0.2i
+ .ti +0.8i
+@@ -452,29 +452,29 @@
+ Give a list of pixels x,y ?
+
+ .TP
+-.B -pa, --print-all-values
++.B \-pa, \-\-print\-all\-values
+ Show all pixel values. This option is identical to -p, but doesn't require
user input.
+
+ .TP
+-.B -pad, --pad-around
++.B \-pad, \-\-pad\-around
+ .TP
+-.B -padtl, --pad-top-left
++.B \-padtl, \-\-pad\-top\-left
+ .TP
+-.B -padbr, --pad-bottom-right
++.B \-padbr, \-\-pad\-bottom\-right
+ Increasing the slice matrix is done by padding an image with the lowest pixel
value. The options above enable different padding modes.
+
+ .TP
+-.B -preacq, --prefix-acquisition
++.B \-preacq, \-\-prefix\-acquisition
+ .TP
+-.B -preser, --prefix-series
+-Respectivily use acquisition or series value in the numbered prefix of the
new filename. This is useful for alphabetical file ordering, where leading
zeros in DICOM elements are missing. See also -alias.
++.B \-preser, \-\-prefix\-series
++Respectivily use acquisition or series value in the numbered prefix of the
new filename. This is useful for alphabetical file ordering, where leading
zeros in DICOM elements are missing. See also \-alias.
+
+ .TP
+-.B -q, --quantitation
++.B \-q, \-\-quantitation
+ Enable quantitation using all scale factors (for now alias for -qc option).
+
+ .TP
+-.B -qs, --quantification
++.B \-qs, \-\-quantification
+ A first scaling option to preserve the (ECAT) quantification (a) or to
consider a first linear scaling slope with intercept (b).
+ .PP
+ .in 1.0i
+@@ -492,11 +492,11 @@
+ .PP
+ If the format does not support floats, the quantified pixel values get
rescaled to an integer. Then only formats that support a global scaling factor
or slope/intercept pair will preserve those quantified values.
+ .PP
+-Note that this option can not be used with -qc.
++Note that this option can not be used with \-qc.
+
+ .PP
+ .TP
+-.B -qc, --calibration
++.B \-qc, \-\-calibration
+ A second quantitation option to preserve the (ECAT) quantification as well as
the (ECAT) calibration (a) or in general, using two rescale slopes with an
intercept (b). These should normally transform pixels into manufacturer
independent values. So one can assume that after a calibration, the new pixels
will represent a real world unit (like concentration values (SUV), hounsfield
units (HU) and alike).
+
+ .PP
+@@ -518,81 +518,81 @@
+ If the format does not support floats, the calibrated pixel values are
rescaled to an integer type. Only formats that support a global scaling factor
or slope/intercept pair preserve those calibrated values.
+
+ .PP
+-Note that this option can not be used with -qs.
++Note that this option can not be used with \-qs.
+
+ .TP
+-.B -r, --rename-file
++.B \-r, \-\-rename\-file
+ Rename the file basename. This option is only useful in case of conversion.
+
+ .TP
+-.B -rs, --reverse-slices
+-Reverse all the slices along the Z-axis. Parameters such as slice orientation
are NOT changed. See also the -fh and -fv options.
++.B \-rs, \-\-reverse\-slices
++Reverse all the slices along the Z\-axis. Parameters such as slice
orientation are NOT changed. See also the \-fh and \-fv options.
+
+ .TP
+-.B -s, --silent
++.B \-s, \-\-silent
+ Suppress all message, warning and error dialogs.
+
+ .TP
+-.B -sag, --sagittal
++.B \-sag, \-\-sagittal
+ Reslice the images of a volume into a sagittal projection while preserving
the real world dimensions.
+
+ .TP
+-.B -si=<slope>:<intercept>
+-Force remap of pixel values using specified slope/intercept (y = s*x + i).
The quantitation option -qc is enabled by default. No spaces are allowed within
this option.
++.B \-si=<slope>:<intercept>
++Force remap of pixel values using specified slope/intercept (y = s*x + i).
The quantitation option \-qc is enabled by default. No spaces are allowed
within this option.
+
+ .TP
+-.B -skip1, --skip-preview-slice
++.B \-skip1, \-\-skip\-preview\-slice
+ Skip the first image in an InterFile. In other words, the first image in the
array will simply be ignored. Use this only when you are sure that the
InterFile does contain an annoying/confusing preview slice.
+
+ .TP
+-.B -split4d, -splitf, --split-frames
++.B \-split4d, \-splitf, \-\-split\-frames
+ .TP
+-.B -split3d, -splits, --split-slices
++.B \-split3d, \-splits, \-\-split\-slices
+ Write out a study into separate files, one for each volume in a time frame
(--split-frames) or each image slice (--split-slices) individually. The names
of the files created will have an extra index number. See also -stack3d and
-stack4d as opposite options.
+
+ .TP
+-.B -spm, --analyze-spm
++.B \-spm, \-\-analyze\-spm
+ Considering Analyze files for/from SPM. In this case the global scaling
factor hidden in imd.funused[1] will be used, as well as the hidden offset
value in imd.funused[0].
+ .PP
+-In case of quantitation, the default output pixel type is float. This option
allows to write integers combined with a global scale factor. To actually use
this scaling factor, you must select a quantitation option like -qs or -qc as
well.
++In case of quantitation, the default output pixel type is float. This option
allows one to write integers combined with a global scale factor. To actually
use this scaling factor, you must select a quantitation option like \-qs or
\-qc as well.
+ .PP
+-See also -ar & -optspm.
++See also \-ar & \-optspm.
+
+ .TP
+-.B -sqr, --make-square
+-Make all image matrices square, using the largest dimension. Images are
padded with the lowest pixel value. See also -pad related options.
++.B \-sqr, \-\-make\-square
++Make all image matrices square, using the largest dimension. Images are
padded with the lowest pixel value. See also \-pad related options.
+
+ .TP
+-.B -sqr2, --make-square-two
+-Make all image matrices square, using the nearest power of two (between 64,
128, 256, 512 and 1024). Images are padded with the lowest pixel value. See
also -pad related options.
++.B \-sqr2, \-\-make\-square\-two
++Make all image matrices square, using the nearest power of two (between 64,
128, 256, 512 and 1024). Images are padded with the lowest pixel value. See
also \-pad related options.
+
+ .TP
+-.B -stack4d, -stackf, --stack-frames
++.B \-stack4d, \-stackf, \-\-stack\-frames
+ .TP
+-.B -stack3d, -stacks, --stack-slices
+-Write separate studies into one file. The --stack-slices option allows to
write single image slice files into one 3D volume, while the --stack-frames
option allows volumes of different time frames being written into one 4D file.
The sequence of stacking is based on the file sequence given at the argument
line. See also -split3d and -split4d as the opposite options.
++.B \-stack3d, \-stacks, \-\-stack\-slices
++Write separate studies into one file. The \-\-stack\-slices option allows one
to write single image slice files into one 3D volume, while the
\-\-stack\-frames option allows volumes of different time frames being written
into one 4D file. The sequence of stacking is based on the file sequence given
at the argument line. See also \-split3d and \-split4d as the opposite options.
+
+ .TP
+-.B -tra, --transverse
++.B \-tra, \-\-transverse
+ Reslice the images of a volume into a transverse projection while preserving
the real world dimensions.
+
+ .TP
+-.B -uin, --use-institution-name <namestring>
++.B \-uin, \-\-use\-institution\-name <namestring>
+ Change the program's default institution name which is applied on studies
without one. However, this does
+ .B not
+ override existing values. For a namestring with spaces, group between double
quotes.
+
+ .TP
+-.B -v, --verbose
++.B \-v, \-\-verbose
+ Verbose mode. Show some explaining messages during the reading
+ and writing of files.
+
+ .TP
+-.B -vifi, --edit-fileinfo
++.B \-vifi, \-\-edit\-fileinfo
+ An interactive routine for editing voxel,array,slice and orient related
entries in the FILEINFO struct.
+
+ .TP
+-.B -w, --overwrite-files
++.B \-w, \-\-overwrite\-files
+ Allow overwrite of existing files, without warning.
+
+ .in 0.2i
+@@ -644,13 +644,13 @@
+ .PP
+ .in 1.0i
+ 1. redirect:
+-.B medcon -f - < inputfile
++.B medcon \-f - < inputfile
+ .PP
+ This is supported for all formats and shouldn't cause any particular
problems. Interactive routines are disabled because stdin is now in use by the
image input.
+ .PP
+ .in 1.0i
+ 2. pipes :
+-.B cat inputfile | medcon -f - format
++.B cat inputfile | medcon \-f - format
+ .PP
+ Actually, this way only one or two formats are supported since seek() calls
are not possible during pipes. The fact is that most of our formats are read
using those seek() calls. In normal operation we already need a quick sneak in
the file to determine the format. Because this fseek() isn't allowed, you must
supply at least the input format too.
+ .PP
+@@ -660,7 +660,7 @@
+ Enabled by using an extra "-" mark on the conversion list.
+ .PP
+ .in 1.0i
+-.B medcon -f inputfile -c - format
++.B medcon \-f inputfile \-c - format
+ .PP
+ Only one inputfile is allowed. The converted output will be send to stdout.
+ .PP
+@@ -668,7 +668,7 @@
+ .PP
+ In case of RAW or ASCII output, the program will print the content of the
internal FILEINFO struct to stderr as well. Please note that the (t)csh shells
do not allow to catch stderr or stdout separately. In case of the bash shell,
it is possible to say:
+ .PP
+-.B medcon -f inputfile -c - intf -b16.12 -qc 1>image 2>header
++.B medcon \-f inputfile \-c - intf \-b16.12 \-qc 1>image 2>header
+ .PP
+ .in 0.2i
+ .SH EXAMPLES
+@@ -677,37 +677,37 @@
+ .B 1.
+ To display the image headers:
+ .ti +1.0i
+-medcon -f filename1 filename2
++medcon \-f filename1 filename2
+ .PP
+ .in 0.2i
+ .B 2.
+ To convert the images:
+ .ti +1.0i
+-medcon -f filename1 filename2 -c gif acr intf
++medcon \-f filename1 filename2 \-c gif acr intf
+ .PP
+ .in 0.2i
+ .B 3.
+ To read interactively
+ .ti +1.0i
+-medcon -i -f filename -c ecat
++medcon \-i \-f filename \-c ecat
+ .PP
+ .in 0.2i
+ .B 4.
+ To extract alternate images:
+ .ti +1.0i
+-medcon -e 1:2:20 -f filename -c gif
++medcon \-e 1:2:20 \-f filename \-c gif
+ .PP
+ .in 0.2i
+ .B 5.
+ To print out pixel values
+ .ti +1.0i
+-medcon -p -f filename
++medcon \-p \-f filename
+ .PP
+ .in 0.2i
+ .B 6.
+ Convert to raw binary images, send to standard output:
+ .ti +1.0i
+-medcon -f filename -c - bin
++medcon \-f filename \-c - bin
+ .PP
+ .in 0.2i
+ .SH FILES
+--- xmedcon-0.13.0.orig/man/xmedcon.1
++++ xmedcon-0.13.0/man/xmedcon.1
+@@ -1,19 +1,19 @@
+ '\" t
+ .TH MEDCON 1
+ .SH NAME
+-xmedcon - MedCon with GUI for the X Window System
++xmedcon \- MedCon with GUI for the X Window System
+ .SH SYNOPSIS
+ .PP
+ .in 0.2i
+ .HP 7
+ .B xmedcon
+-[options] [-f <file>]
++[options] [\-f <file>]
+ .PP
+ .in 0.8i
+ or
+ .PP
+ .B xmedcon
+-[--help | <file>]
++[\-\-help | <file>]
+ .PP
+ .br
+ .SH DESCRIPTION
+@@ -23,7 +23,7 @@
+ is an X-Windows graphical userinterface built around the MedCon library. The
program is capable of reading grayscale (reconstructed) medical image formats
with multiple images and is based on the amazing Gtk+ and Imlib libraries.
+ .PP
+ .in 0.2i
+-For more help read the related HTML files which can be send to a Netscape
Browser from within the program. For information about the possible MedCon
options that can be set directly from the command-line type 'xmedcon --help' or
read the man-page medcon(1).
++For more help read the related HTML files which can be send to a Netscape
Browser from within the program. For information about the possible MedCon
options that can be set directly from the command-line type 'xmedcon \-\-help'
or read the man\-page medcon(1).
+
+ .SH FILES
+ .PP
Added: trunk/packages/xmedcon/trunk/debian/patches/series
===================================================================
--- trunk/packages/xmedcon/trunk/debian/patches/series
(rev 0)
+++ trunk/packages/xmedcon/trunk/debian/patches/series 2013-07-24 19:19:01 UTC
(rev 14226)
@@ -0,0 +1 @@
+man-spelling.patch
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