Author: tille Date: 2013-08-22 14:46:32 +0000 (Thu, 22 Aug 2013) New Revision: 14486
Modified: trunk/packages/R/r-bioc-rtracklayer/trunk/debian/changelog trunk/packages/R/r-bioc-rtracklayer/trunk/debian/control Log: Add existing Build-Depends and mention the missing ones in changelog todo list Modified: trunk/packages/R/r-bioc-rtracklayer/trunk/debian/changelog =================================================================== --- trunk/packages/R/r-bioc-rtracklayer/trunk/debian/changelog 2013-08-22 14:21:39 UTC (rev 14485) +++ trunk/packages/R/r-bioc-rtracklayer/trunk/debian/changelog 2013-08-22 14:46:32 UTC (rev 14486) @@ -1,5 +1,15 @@ r-bioc-rtracklayer (1.20.4-1) UNRELEASED; urgency=low * Initial release (closes: #???). + The following preconditions are needed but missing in Debian + GenomicRanges: http://www.bioconductor.org/packages/release/bioc/html/GenomicRanges.html + IRanges: http://bioconductor.org/packages/2.3/bioc/html/IRanges.html + Biostrings: http://www.bioconductor.org/packages/2.2/bioc/html/Biostrings.html + BSgenome: http://bioconductor.org/packages/2.4/bioc/html/BSgenome.html + zlibbioc: http://bioconductor.org/packages/2.12/bioc/html/zlibbioc.html + Remark: This should *really* be avoided as the homepage confirms that it + should not be needed on sites with zlib installed + RCurl: http://cran.r-project.org/web/packages/RCurl/index.html + Rsamtools: http://www.bioconductor.org/packages/release/bioc/html/Rsamtools.html -- Andreas Tille <[email protected]> Thu, 22 Aug 2013 14:01:29 +0200 Modified: trunk/packages/R/r-bioc-rtracklayer/trunk/debian/control =================================================================== --- trunk/packages/R/r-bioc-rtracklayer/trunk/debian/control 2013-08-22 14:21:39 UTC (rev 14485) +++ trunk/packages/R/r-bioc-rtracklayer/trunk/debian/control 2013-08-22 14:46:32 UTC (rev 14486) @@ -5,7 +5,9 @@ Priority: optional Build-Depends: debhelper (>= 9), cdbs, - r-base-dev + r-base-dev, + r-cran-xml, + r-bioc-biocgenerics Standards-Version: 3.9.4 Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-rtracklayer/trunk/ Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-rtracklayer/trunk/ @@ -14,7 +16,9 @@ Package: r-bioc-rtracklayer Architecture: all Depends: ${R:Depends}, - ${misc:Depends} + ${misc:Depends}, + r-cran-xml, + r-bioc-biocgenerics Description: GNU R interface to genome browsers and their annotation tracks Extensible framework for interacting with multiple genome browsers (currently UCSC built-in) and manipulating annotation tracks in various _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
