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tille pushed a change to branch upstream
in repository python-csb.
from de1f8cb Imported Upstream version 1.2.1+dfsg
new 1c84ae5 Imported Upstream version 1.2.2+dfsg
The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
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Summary of changes:
PKG-INFO | 364 ++++----
csb/__init__.py | 542 ++++++------
csb/apps/csfrag.py | 3 +-
csb/bio/fragments/__init__.py | 586 ++-----------
csb/bio/fragments/hhsites.py | 152 ----
csb/bio/fragments/isites.py | 1122 ------------------------
csb/bio/io/__init__.py | 1 -
csb/bio/io/isites.py | 326 -------
csb/statistics/maxent.py | 4 +-
csb/statistics/pdf/__init__.py | 62 +-
csb/statistics/pdf/parameterized.py | 346 ++++++++
csb/statistics/rand.py | 2 +-
csb/statistics/samplers/mc/singlechain.py | 69 +-
csb/statistics/scalemixture.py | 7 +-
csb/test/__init__.py | 180 ++--
csb/test/cases/bio/fragments/__init__.py | 17 +-
csb/test/cases/bio/io/isites/__init__.py | 38 -
csb/test/cases/statistics/pdf/parameterized.py | 323 +++++++
csb/test/cases/statistics/samplers/__init__.py | 190 +++-
19 files changed, 1574 insertions(+), 2760 deletions(-)
delete mode 100644 csb/bio/fragments/hhsites.py
delete mode 100644 csb/bio/fragments/isites.py
delete mode 100644 csb/bio/io/isites.py
create mode 100644 csb/statistics/pdf/parameterized.py
delete mode 100644 csb/test/cases/bio/io/isites/__init__.py
create mode 100644 csb/test/cases/statistics/pdf/parameterized.py
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