This is an automated email from the git hooks/post-receive script. plessy pushed a commit to branch debian/unstable in repository htslib.
commit 8c7f7d47b9510aa9084ca782dd5144533d051ef3 Author: Charles Plessy <[email protected]> Date: Sat Aug 16 21:30:10 2014 +0900 Replace the old tabix package (from the tabix source package). --- debian/control | 14 +++++++++++++- debian/tabix.install | 2 ++ debian/tabix.links | 1 + debian/tabix.manpages | 1 + 4 files changed, 17 insertions(+), 1 deletion(-) diff --git a/debian/control b/debian/control index 18f52d8..f443ee9 100644 --- a/debian/control +++ b/debian/control @@ -1,7 +1,7 @@ Source: htslib Maintainer: Debian Med Packaging Team <[email protected]> Uploaders: Charles Plessy <[email protected]> -Section: libs +Section: science Priority: optional Build-Depends: debhelper (>= 9), dh-exec, @@ -14,6 +14,7 @@ Homepage: https://github.com/samtools/htslib Package: libhts1 Architecture: any Multi-Arch: same +Section: libs Pre-Depends: ${misc:Pre-Depends} Depends: ${shlibs:Depends}, ${misc:Depends} @@ -53,3 +54,14 @@ Description: Test data for HTSlib sequence data obtained by high-throughput sequencing. . This package contains test files and scripts for the HTSlib. + +Package: tabix +Architecture: any +Depends: ${misc:Depends}, ${shlibs:Depends} +Description: generic indexer for TAB-delimited genome position files + Tabix indexes files where some columns indicate sequence coordinates: name + (usually a chromosme), start and stop. The input data file must be position + sorted and compressed by bgzip (provided in this package), which has a gzip + like interface. After indexing, tabix is able to quickly retrieve data lines by + chromosomal coordinates. Fast data retrieval also works over network if an URI + is given as a file name. diff --git a/debian/tabix.install b/debian/tabix.install new file mode 100644 index 0000000..431c734 --- /dev/null +++ b/debian/tabix.install @@ -0,0 +1,2 @@ +tabix usr/bin +bgzip usr/bin diff --git a/debian/tabix.links b/debian/tabix.links new file mode 100644 index 0000000..743712c --- /dev/null +++ b/debian/tabix.links @@ -0,0 +1 @@ +usr/share/man/man1/tabix.1.gz usr/share/man/man1/bgzip.1.gz diff --git a/debian/tabix.manpages b/debian/tabix.manpages new file mode 100644 index 0000000..bb616e0 --- /dev/null +++ b/debian/tabix.manpages @@ -0,0 +1 @@ +tabix.1 -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/htslib.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
