Author: tille Date: 2015-01-29 22:26:45 +0000 (Thu, 29 Jan 2015) New Revision: 18628
Removed: trunk/packages/rna-star/trunk/debian/files Modified: trunk/packages/rna-star/trunk/debian/control trunk/packages/rna-star/trunk/debian/install trunk/packages/rna-star/trunk/debian/rules Log: Try some tricks to get it builded but failed for the moment Modified: trunk/packages/rna-star/trunk/debian/control =================================================================== --- trunk/packages/rna-star/trunk/debian/control 2015-01-29 22:26:07 UTC (rev 18627) +++ trunk/packages/rna-star/trunk/debian/control 2015-01-29 22:26:45 UTC (rev 18628) @@ -4,7 +4,9 @@ Maintainer: Debian Med Packaging Team <[email protected]> Uploaders: Steffen Moeller <[email protected]>, Andreas Tille <[email protected]> -Build-Depends: debhelper (>= 9), libhts-dev +Build-Depends: debhelper (>= 9), + libhts-dev, + vim-common Standards-Version: 3.9.6 Homepage: https://code.google.com/p/rna-star/ Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/rna-star/trunk/ Deleted: trunk/packages/rna-star/trunk/debian/files =================================================================== --- trunk/packages/rna-star/trunk/debian/files 2015-01-29 22:26:07 UTC (rev 18627) +++ trunk/packages/rna-star/trunk/debian/files 2015-01-29 22:26:45 UTC (rev 18628) @@ -1 +0,0 @@ -star_2.4.0i-1_amd64.deb science optional Modified: trunk/packages/rna-star/trunk/debian/install =================================================================== --- trunk/packages/rna-star/trunk/debian/install 2015-01-29 22:26:07 UTC (rev 18627) +++ trunk/packages/rna-star/trunk/debian/install 2015-01-29 22:26:45 UTC (rev 18628) @@ -1 +1 @@ - +source/STAR usr/bin Modified: trunk/packages/rna-star/trunk/debian/rules =================================================================== --- trunk/packages/rna-star/trunk/debian/rules 2015-01-29 22:26:07 UTC (rev 18627) +++ trunk/packages/rna-star/trunk/debian/rules 2015-01-29 22:26:45 UTC (rev 18628) @@ -4,8 +4,8 @@ # Uncomment this to turn on verbose mode. #export DH_VERBOSE=1 -DPKG_EXPORT_BUILDFLAGS = 1 -include /usr/share/dpkg/buildflags.mk +#DPKG_EXPORT_BUILDFLAGS = 1 +#include /usr/share/dpkg/buildflags.mk export CCFLAGS=-flto $(CXXFLAGS) $(CPPFLAGS) -std=c++0x export LDFLAGS+=-flto -pthread -lhts -lz @@ -14,15 +14,12 @@ dh $@ override_dh_auto_build: + mkdir -p source/htslib && ln -s /usr/include/htslib source/htslib cd source && $(MAKE) CCFLAGS_common=-flto CCFLAGS="$(CCFLAGS)" LDFLAGS="$(LDFLAGS)" -override_dh_auto_install: - mkdir -p debian/star/usr/bin/ - cp source/STAR debian/star/usr/bin/ - - override_dh_auto_clean: cd source && $(MAKE) clean + rm -f source/parametersDefault.xxd get-orig-source: uscan --verbose --force-download --repack --compress xz _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
