This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository bwa.
commit a13c75225905861a18adf7665ec4d2fb3bc0b220 Merge: 013d1b5 41430b9 Author: Andreas Tille <[email protected]> Date: Tue Jan 27 08:47:34 2015 +0100 Merge tag 'upstream/0.7.12' Upstream version 0.7.12 Makefile | 10 +- NEWS.md | 72 +++++ README-alt.md | 178 ++++++++++++ README.md | 72 +++-- bntseq.c | 48 +++- bntseq.h | 1 + bwa-helper.js | 706 ----------------------------------------------- bwa.1 | 58 +++- bwa.c | 146 +++++++++- bwa.h | 16 +- bwakit/README.md | 115 ++++++++ bwakit/bwa-postalt.js | 524 +++++++++++++++++++++++++++++++++++ bwakit/run-HLA | 20 ++ bwakit/run-bwamem | 186 +++++++++++++ bwakit/run-gen-ref | 39 +++ bwakit/typeHLA-selctg.js | 62 +++++ bwakit/typeHLA.js | 496 +++++++++++++++++++++++++++++++++ bwakit/typeHLA.sh | 49 ++++ bwamem.c | 159 ++++++++--- bwamem.h | 15 +- bwamem_extra.c | 68 +++-- bwamem_pair.c | 102 ++++--- bwashm.c | 213 ++++++++++++++ bwt.c | 42 ++- bwt.h | 4 +- bwt_gen.c | 9 +- bwtindex.c | 18 +- example.c | 12 +- fastmap.c | 251 ++++++++++++----- kseq.h | 18 +- kthread.c | 104 ++++++- main.c | 8 +- utils.c | 11 + utils.h | 2 +- 34 files changed, 2846 insertions(+), 988 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/bwa.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
