This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository r-bioc-edger.
commit 225b55b332a405c5dc14443b35b0e999b5fda6f0 Author: Andreas Tille <[email protected]> Date: Sun Jul 19 22:47:16 2015 +0200 Adapt patch --- debian/patches/do_not_attempt_locfit_test.patch | 23 +---------------------- 1 file changed, 1 insertion(+), 22 deletions(-) diff --git a/debian/patches/do_not_attempt_locfit_test.patch b/debian/patches/do_not_attempt_locfit_test.patch index fbab05c..6cbc775 100644 --- a/debian/patches/do_not_attempt_locfit_test.patch +++ b/debian/patches/do_not_attempt_locfit_test.patch @@ -38,28 +38,7 @@ Description: r-cran-locfit has a non-free license and thus can not be packaged group <- factor(c(1,1,2,2)) --- a/tests/edgeR-Tests.Rout.save +++ b/tests/edgeR-Tests.Rout.save -@@ -296,20 +296,6 @@ Loading required package: splines - Min. 1st Qu. Median Mean 3rd Qu. Max. - 0.1385 0.1792 0.1964 0.1935 0.2026 0.2709 - > --> dglm2 <- estimateDisp(dglm, design) --> summary(dglm2$tagwise.dispersion) -- Min. 1st Qu. Median Mean 3rd Qu. Max. -- 0.1766 0.1789 0.1814 0.1846 0.1870 0.2119 --> dglm2 <- estimateDisp(dglm, design, prior.df=20) --> summary(dglm2$tagwise.dispersion) -- Min. 1st Qu. Median Mean 3rd Qu. Max. -- 0.1527 0.1669 0.1814 0.1858 0.1951 0.2497 --> dglm2 <- estimateDisp(dglm, design, robust=TRUE) --Loading required package: statmod --> summary(dglm2$tagwise.dispersion) -- Min. 1st Qu. Median Mean 3rd Qu. Max. -- 0.1766 0.1789 0.1814 0.1846 0.1870 0.2119 --> - > # Continuous trend - > nlibs <- 3 - > ntags <- 1000 -@@ -434,19 +420,6 @@ $AveLogCPM +@@ -264,19 +264,6 @@ $AveLogCPM 995 more elements ... > -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/r-bioc-edger.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
