Author: tille Date: 2015-10-29 22:01:55 +0000 (Thu, 29 Oct 2015) New Revision: 20331
Added: trunk/packages/R/r-bioc-xvector/trunk/debian/patches/ trunk/packages/R/r-bioc-xvector/trunk/debian/patches/series trunk/packages/R/r-bioc-xvector/trunk/debian/patches/use_debian_packaged_zlib.patch Modified: trunk/packages/R/r-bioc-xvector/trunk/debian/changelog trunk/packages/R/r-bioc-xvector/trunk/debian/control trunk/packages/R/r-bioc-xvector/trunk/debian/watch Log: New upstream version, Use Debian packaged zlib Modified: trunk/packages/R/r-bioc-xvector/trunk/debian/changelog =================================================================== --- trunk/packages/R/r-bioc-xvector/trunk/debian/changelog 2015-10-29 21:41:38 UTC (rev 20330) +++ trunk/packages/R/r-bioc-xvector/trunk/debian/changelog 2015-10-29 22:01:55 UTC (rev 20331) @@ -1,3 +1,10 @@ +r-bioc-xvector (0.10.0-1) unstable; urgency=medium + + * New upstream version + * Use Debian packaged zlib + + -- Andreas Tille <[email protected]> Thu, 29 Oct 2015 22:57:25 +0100 + r-bioc-xvector (0.8.0-1) unstable; urgency=medium * New upstream version Modified: trunk/packages/R/r-bioc-xvector/trunk/debian/control =================================================================== --- trunk/packages/R/r-bioc-xvector/trunk/debian/control 2015-10-29 21:41:38 UTC (rev 20330) +++ trunk/packages/R/r-bioc-xvector/trunk/debian/control 2015-10-29 22:01:55 UTC (rev 20331) @@ -7,7 +7,7 @@ Build-Depends: debhelper (>= 9), cdbs, r-base-dev, - r-bioc-iranges (>= 2.2.0) + r-bioc-iranges (>= 2.4.0) Standards-Version: 3.9.6 Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-xvector/trunk/ Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-xvector/trunk/ Added: trunk/packages/R/r-bioc-xvector/trunk/debian/patches/series =================================================================== --- trunk/packages/R/r-bioc-xvector/trunk/debian/patches/series (rev 0) +++ trunk/packages/R/r-bioc-xvector/trunk/debian/patches/series 2015-10-29 22:01:55 UTC (rev 20331) @@ -0,0 +1 @@ +use_debian_packaged_zlib.patch Added: trunk/packages/R/r-bioc-xvector/trunk/debian/patches/use_debian_packaged_zlib.patch =================================================================== --- trunk/packages/R/r-bioc-xvector/trunk/debian/patches/use_debian_packaged_zlib.patch (rev 0) +++ trunk/packages/R/r-bioc-xvector/trunk/debian/patches/use_debian_packaged_zlib.patch 2015-10-29 22:01:55 UTC (rev 20331) @@ -0,0 +1,26 @@ +Author: Andreas Tille <[email protected]> +LastChanged: Thu, 29 Oct 2015 22:45:15 +0100 +Description: If the systems includes zlib natively there is no point in + requiring the import of zlibbioc + +--- a/DESCRIPTION ++++ b/DESCRIPTION +@@ -8,7 +8,7 @@ Maintainer: H. Pages <[email protected] + biocViews: Infrastructure, DataRepresentation + Depends: R (>= 2.8.0), methods, BiocGenerics (>= 0.11.3), S4Vectors (>= + 0.7.1), IRanges (>= 2.3.7) +-Imports: methods, zlibbioc, BiocGenerics, S4Vectors, IRanges ++Imports: methods, BiocGenerics, S4Vectors, IRanges + LinkingTo: S4Vectors, IRanges + Suggests: Biostrings, drosophila2probe, RUnit + License: Artistic-2.0 +--- a/NAMESPACE ++++ b/NAMESPACE +@@ -1,7 +1,6 @@ + useDynLib(XVector) + + import(methods) +-import(zlibbioc) + import(BiocGenerics) + import(S4Vectors) + import(IRanges) Modified: trunk/packages/R/r-bioc-xvector/trunk/debian/watch =================================================================== --- trunk/packages/R/r-bioc-xvector/trunk/debian/watch 2015-10-29 21:41:38 UTC (rev 20330) +++ trunk/packages/R/r-bioc-xvector/trunk/debian/watch 2015-10-29 22:01:55 UTC (rev 20331) @@ -1,3 +1,3 @@ version=3 -opts=downloadurlmangle=s/\.\./packages\/release\/bioc/ \ +opts=downloadurlmangle=s?^(.*)\.\.?http:$1packages/release/bioc? \ http://www.bioconductor.org/packages/release/bioc/html/XVector.html .*/XVector_([\d\.]+)\.tar\.gz _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
