Author: tille Date: 2015-11-06 07:52:36 +0000 (Fri, 06 Nov 2015) New Revision: 20398
Added: trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/ trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/changelog trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/control trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/watch Removed: trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/changelog trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/control trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/watch Log: Tagged 1.6.1-1 Deleted: trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/changelog =================================================================== --- trunk/packages/R/r-bioc-genomicalignments/trunk/debian/changelog 2015-10-30 15:24:37 UTC (rev 20351) +++ trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/changelog 2015-11-06 07:52:36 UTC (rev 20398) @@ -1,28 +0,0 @@ -r-bioc-genomicalignments (1.4.1-1) unstable; urgency=medium - - * New upstream version - * Disable patch - * Citation - * New versioned dependency r-bioc-rsamtools (>= 1.20.4) - - -- Andreas Tille <[email protected]> Thu, 25 Jun 2015 23:04:53 +0200 - -r-bioc-genomicalignments (1.2.0-1) experimental; urgency=medium - - * New upstrem version - * cme fix dpkg-control - * Adapt to new dependencies - - -- Andreas Tille <[email protected]> Tue, 21 Oct 2014 06:07:22 +0200 - -r-bioc-genomicalignments (1.0.6-1) unstable; urgency=medium - - * New upstream version - - -- Andreas Tille <[email protected]> Wed, 17 Sep 2014 11:07:39 +0200 - -r-bioc-genomicalignments (1.0.2-1) unstable; urgency=medium - - * Initial release (closes: #754154) - - -- Andreas Tille <[email protected]> Tue, 08 Jul 2014 10:55:48 +0200 Copied: trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/changelog (from rev 20374, trunk/packages/R/r-bioc-genomicalignments/trunk/debian/changelog) =================================================================== --- trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/changelog (rev 0) +++ trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/changelog 2015-11-06 07:52:36 UTC (rev 20398) @@ -0,0 +1,36 @@ +r-bioc-genomicalignments (1.6.1-1) unstable; urgency=medium + + * New upstream version + Closes: #803479 + * Add new (Build-)Depends: r-bioc-summarizedexperiment + + -- Andreas Tille <[email protected]> Sat, 31 Oct 2015 19:33:11 +0100 + +r-bioc-genomicalignments (1.4.1-1) unstable; urgency=medium + + * New upstream version + * Disable patch + * Citation + * New versioned dependency r-bioc-rsamtools (>= 1.20.4) + + -- Andreas Tille <[email protected]> Thu, 25 Jun 2015 23:04:53 +0200 + +r-bioc-genomicalignments (1.2.0-1) experimental; urgency=medium + + * New upstrem version + * cme fix dpkg-control + * Adapt to new dependencies + + -- Andreas Tille <[email protected]> Tue, 21 Oct 2014 06:07:22 +0200 + +r-bioc-genomicalignments (1.0.6-1) unstable; urgency=medium + + * New upstream version + + -- Andreas Tille <[email protected]> Wed, 17 Sep 2014 11:07:39 +0200 + +r-bioc-genomicalignments (1.0.2-1) unstable; urgency=medium + + * Initial release (closes: #754154) + + -- Andreas Tille <[email protected]> Tue, 08 Jul 2014 10:55:48 +0200 Deleted: trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/control =================================================================== --- trunk/packages/R/r-bioc-genomicalignments/trunk/debian/control 2015-10-30 15:24:37 UTC (rev 20351) +++ trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/control 2015-11-06 07:52:36 UTC (rev 20398) @@ -1,29 +0,0 @@ -Source: r-bioc-genomicalignments -Maintainer: Debian Med Packaging Team <[email protected]> -Uploaders: Andreas Tille <[email protected]> -Section: gnu-r -Priority: optional -Build-Depends: debhelper (>= 9), - cdbs, - r-base-dev, - r-bioc-rsamtools (>= 1.20.4), - r-bioc-biocparallel (>= 1.0.0) -Standards-Version: 3.9.6 -Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-genomicalignments/trunk/ -Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-genomicalignments/trunk/ -Homepage: http://bioconductor.org/packages/release/bioc/html/GenomicAlignments.html - -Package: r-bioc-genomicalignments -Architecture: any -Depends: ${R:Depends}, - ${misc:Depends}, - ${shlibs:Depends}, - r-bioc-rsamtools (>= 1.20.4), - r-bioc-biocparallel (>= 1.0.0) -Recommends: r-bioc-shortread -Description: BioConductor representation and manipulation of short genomic alignments - This BioConductor package provides efficient containers for storing and - manipulating short genomic alignments (typically obtained by aligning - short reads to a reference genome). This includes read counting, - computing the coverage, junction detection, and working with the - nucleotide content of the alignments. Copied: trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/control (from rev 20374, trunk/packages/R/r-bioc-genomicalignments/trunk/debian/control) =================================================================== --- trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/control (rev 0) +++ trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/control 2015-11-06 07:52:36 UTC (rev 20398) @@ -0,0 +1,29 @@ +Source: r-bioc-genomicalignments +Maintainer: Debian Med Packaging Team <[email protected]> +Uploaders: Andreas Tille <[email protected]> +Section: gnu-r +Priority: optional +Build-Depends: debhelper (>= 9), + cdbs, + r-base-dev, + r-bioc-rsamtools (>= 1.22.0), + r-bioc-summarizedexperiment +Standards-Version: 3.9.6 +Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-genomicalignments/trunk/ +Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-genomicalignments/trunk/ +Homepage: http://bioconductor.org/packages/release/bioc/html/GenomicAlignments.html + +Package: r-bioc-genomicalignments +Architecture: any +Depends: ${R:Depends}, + ${misc:Depends}, + ${shlibs:Depends}, + r-bioc-rsamtools (>= 1.22.0), + r-bioc-summarizedexperiment +Recommends: r-bioc-shortread +Description: BioConductor representation and manipulation of short genomic alignments + This BioConductor package provides efficient containers for storing and + manipulating short genomic alignments (typically obtained by aligning + short reads to a reference genome). This includes read counting, + computing the coverage, junction detection, and working with the + nucleotide content of the alignments. Deleted: trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/watch =================================================================== --- trunk/packages/R/r-bioc-genomicalignments/trunk/debian/watch 2015-10-30 15:24:37 UTC (rev 20351) +++ trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/watch 2015-11-06 07:52:36 UTC (rev 20398) @@ -1,3 +0,0 @@ -version=3 -opts=downloadurlmangle=s/\.\./packages\/release\/bioc/ \ - http://www.bioconductor.org/packages/release/bioc/html/GenomicAlignments.html .*/GenomicAlignments_([\d\.]+)\.tar\.gz Copied: trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/watch (from rev 20374, trunk/packages/R/r-bioc-genomicalignments/trunk/debian/watch) =================================================================== --- trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/watch (rev 0) +++ trunk/packages/R/r-bioc-genomicalignments/tags/1.6.1-1/watch 2015-11-06 07:52:36 UTC (rev 20398) @@ -0,0 +1,3 @@ +version=3 +opts=downloadurlmangle=s?^(.*)\.\.?http:$1packages/release/bioc? \ + http://www.bioconductor.org/packages/release/bioc/html/GenomicAlignments.html .*/GenomicAlignments_([\d\.]+)\.tar\.gz _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
