This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository vsearch.
commit 4a4f7f012d526af4a2442f6eed77ccf32e0424f8 Author: Andreas Tille <[email protected]> Date: Thu Mar 10 23:23:33 2016 +0100 Remove patch applied upstream --- debian/patches/series | 1 - debian/patches/spelling.patch | 44 ------------------------------------------- 2 files changed, 45 deletions(-) diff --git a/debian/patches/series b/debian/patches/series index 75870a2..87193bd 100644 --- a/debian/patches/series +++ b/debian/patches/series @@ -1,2 +1 @@ sysconf_memory_sizing.patch -spelling.patch diff --git a/debian/patches/spelling.patch b/debian/patches/spelling.patch deleted file mode 100644 index d2a5de6..0000000 --- a/debian/patches/spelling.patch +++ /dev/null @@ -1,44 +0,0 @@ -Description: Fix some spelling issues -Author: Andreas Tille <[email protected]> -Last-Update: Sat, 30 Jan 2016 14:02:24 +0100 - ---- a/src/vsearch.cc -+++ b/src/vsearch.cc -@@ -2153,7 +2153,7 @@ void cmd_shuffle() - void cmd_subsample() - { - if ((!opt_fastaout) && (!opt_fastqout)) -- fatal("Specifiy output files for subsampling with --fastaout and/or --fastqout"); -+ fatal("Specify output files for subsampling with --fastaout and/or --fastqout"); - - if ((opt_sample_pct > 0) == (opt_sample_size > 0)) - fatal("Specify either --sample_pct or --sample_size, not both"); -@@ -2172,7 +2172,7 @@ void cmd_maskfasta() - void cmd_fastx_mask() - { - if ((!opt_fastaout) && (!opt_fastqout)) -- fatal("Specifiy output files for masking with --fastaout and/or --fastqout"); -+ fatal("Specify output files for masking with --fastaout and/or --fastqout"); - - fastx_mask(); - } ---- a/man/vsearch.1 -+++ b/man/vsearch.1 -@@ -840,7 +840,7 @@ truncation) will be discarded (1 by defa - ambiguous bases (N's), as specified with the \-\-fastq_maxns will also - be discarded (no limit by default). Staggered reads will not be merged - unless the \-\-fastq_allowmergestagger option is specified. The --minimum length of the overlap region between the reads may be specfied -+minimum length of the overlap region between the reads may be specified - with the \-\-minovlen option (default 1), and the overlap region may - not include more mismatches than specified with the \-\-maxdiffs - option (no limit by default), otherwise the read pair will be -@@ -986,7 +986,7 @@ The argument to the \-\-qmask and \-\-db - or dust. If the argument is none, the no masking is performed. If the - argument is soft the lower case symbols will be masked. Finally, if - the argument is dust, the sequence will be masked using the DUST --algorith by Tatusov and Lipman to mask low-complexity regions. -+algorithm by Tatusov and Lipman to mask low-complexity regions. - - If the \-\-hardmask option is specified, all masked regions will be - converted to N's, otherwise masked regions will be indicated by lower -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/vsearch.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
