This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository stacks.
commit bb0755c6414359bde461ec5bdb7de0dbfcd4a595 Merge: 7ef7ebd 83ef6c3 Author: Andreas Tille <[email protected]> Date: Tue Apr 19 10:43:16 2016 +0200 Merge tag 'upstream/1.38' Upstream version 1.38 ChangeLog | 24 + Makefile.am | 10 +- Makefile.in | 195 +- aclocal.m4 | 65 +- config/compile | 2 +- config/depcomp | 2 +- config/install-sh | 366 +- config/missing | 2 +- config/test-driver | 15 +- configure | 33 +- configure.ac | 2 +- php/CatalogClass.php | 8 +- php/catalog.php | 5 +- php/export_batch.php | 6 + scripts/denovo_map.pl | 1017 +++-- scripts/ref_map.pl | 972 +++-- sql/stacks.sql | 1 + src/DNANSeq.cc | 2 +- src/DNANSeq.h | 4 +- src/GappedAln.h | 594 +++ src/PopMap.h | 254 +- src/PopSum.h | 1113 ++--- src/SamI.h | 31 +- src/aln_utils.cc | 216 + src/aln_utils.h | 42 + src/catalog_utils.cc | 378 +- src/constants.h | 4 +- src/cstacks.cc | 642 ++- src/cstacks.h | 7 +- src/kmers.cc | 273 +- src/kmers.h | 25 +- src/locus.cc | 62 +- src/locus.h | 42 +- src/mstack.cc | 88 +- src/mstack.h | 18 +- src/populations.cc | 11098 +++++++++++++++++++++++------------------------ src/process_radtags.cc | 4 +- src/pstacks.cc | 30 +- src/sql_utilities.h | 660 +-- src/sstacks.cc | 496 ++- src/sstacks.h | 32 +- src/stacks.cc | 28 +- src/stacks.h | 163 +- src/ustacks.cc | 2810 +++++++----- src/ustacks.h | 43 +- src/utils.cc | 8 + src/utils.h | 2 + 47 files changed, 12550 insertions(+), 9344 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/stacks.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
