This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository orthanc-imagej.
commit 5f97e575893edc549116cba42779933297273967 Author: Andreas Tille <[email protected]> Date: Tue Apr 19 14:54:23 2016 +0200 Re-inject debian/ dir --- debian/README.Debian | 7 +++++++ debian/changelog | 12 ++++++++++++ debian/compat | 1 + debian/control | 35 +++++++++++++++++++++++++++++++++++ debian/copyright | 29 +++++++++++++++++++++++++++++ debian/dirs | 1 + debian/install | 1 + debian/patches/json-simple | 38 ++++++++++++++++++++++++++++++++++++++ debian/patches/series | 1 + debian/rules | 19 +++++++++++++++++++ debian/source/format | 1 + debian/upstream/metadata | 6 ++++++ debian/watch | 3 +++ 13 files changed, 154 insertions(+) diff --git a/debian/README.Debian b/debian/README.Debian new file mode 100644 index 0000000..b4751bc --- /dev/null +++ b/debian/README.Debian @@ -0,0 +1,7 @@ +This is a plugin for ImageJ to browse and download the content of an +Orthanc server. + +Homepage: http://www.orthanc-server.com/static.php?page=imagej + +The plugin is accessible from the "File" -> "Import" -> "Orthanc" menu +entry in ImageJ. diff --git a/debian/changelog b/debian/changelog new file mode 100644 index 0000000..c88d212 --- /dev/null +++ b/debian/changelog @@ -0,0 +1,12 @@ +orthanc-imagej (1.1+dfsg-1) unstable; urgency=medium + + * New upstream version. + * Updated URLs to the project, the code repository and the downloads. + + -- Sebastien Jodogne <[email protected]> Fri, 15 Apr 2016 11:44:54 +0200 + +orthanc-imagej (1.0.0+dfsg-1) unstable; urgency=low + + * Initial release. (Closes: #772561) + + -- Sebastien Jodogne <[email protected]> Mon, 15 Dec 2014 15:55:43 +0100 diff --git a/debian/compat b/debian/compat new file mode 100644 index 0000000..ec63514 --- /dev/null +++ b/debian/compat @@ -0,0 +1 @@ +9 diff --git a/debian/control b/debian/control new file mode 100644 index 0000000..4b62b52 --- /dev/null +++ b/debian/control @@ -0,0 +1,35 @@ +Source: orthanc-imagej +Maintainer: Debian Med Packaging Team <[email protected]> +Uploaders: Sebastien Jodogne <[email protected]>, + Andreas Tille <[email protected]> +Section: science +Priority: optional +Standards-Version: 3.9.7 +Build-Depends: cmake (>= 2.8), + default-jdk | openjdk-8-jdk, + debhelper (>= 9), + imagej, + libjson-simple-java +Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/orthanc-imagej/trunk/ +Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/orthanc-imagej/trunk/ +Homepage: http://www.orthanc-server.com/static.php?page=imagej + +Package: orthanc-imagej +Architecture: all +Depends: ${misc:Depends}, + default-jre | openjdk-8-jre, + imagej, + libjson-simple-java +Recommends: orthanc +Description: ImageJ plugin to import images from Orthanc + This ImageJ plugin allows ImageJ to browse the content of an Orthanc + server, then import 2D/3D DICOM images from Orthanc into ImageJ. + Orthanc is a lightweight, RESTful DICOM server for healthcare and + medical research. + . + This plugin simplifies the indexation of DICOM images if using + ImageJ (e.g. for quality control of DICOM modalities, or for + pedagogical use). There is also no need to carry on any complex + network configuration, since the plugin directly uses the REST + API of Orthanc. This makes its installation and its use + quite straightforward. diff --git a/debian/copyright b/debian/copyright new file mode 100644 index 0000000..5a11a28 --- /dev/null +++ b/debian/copyright @@ -0,0 +1,29 @@ +Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Upstream-Name: OrthancImageJ +Upstream-Contact: Sebastien Jodogne <[email protected]> +Source: https://bitbucket.org/sjodogne/orthanc-imagej/ +Files-Excluded: org/* + +Files: * +Copyright: 2012-2016 CHU of Liege (Belgium), and Sebastien Jodogne <[email protected]> +License: GPL-3 + + +License: GPL-3 + This program is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or (at + your option) any later version. + . + This program is distributed in the hope that it will be useful, but + WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + General Public License for more details. + . + You should have received a copy of the GNU General Public License along + with this package; if not, write to the Free Software Foundation, Inc., + 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. + . + On Debian systems, the full text of the GNU General Public License + version 3 can be found in the file + `/usr/share/common-licenses/GPL-3'. diff --git a/debian/dirs b/debian/dirs new file mode 100644 index 0000000..db0cbfb --- /dev/null +++ b/debian/dirs @@ -0,0 +1 @@ +usr/share/imagej/plugins diff --git a/debian/install b/debian/install new file mode 100644 index 0000000..6a8750a --- /dev/null +++ b/debian/install @@ -0,0 +1 @@ +Build/Orthanc_Import.jar usr/share/imagej/plugins/ diff --git a/debian/patches/json-simple b/debian/patches/json-simple new file mode 100644 index 0000000..097d359 --- /dev/null +++ b/debian/patches/json-simple @@ -0,0 +1,38 @@ +Description: Patch to link against Debian's libjson-simple-java package +Author: Sebastien Jodogne <[email protected]> +--- +This patch header follows DEP-3: http://dep.debian.net/deps/dep3/ +Index: OrthancImageJ-1.1/CMakeLists.txt +=================================================================== +--- OrthancImageJ-1.1.orig/CMakeLists.txt ++++ OrthancImageJ-1.1/CMakeLists.txt +@@ -6,7 +6,7 @@ find_package(Java REQUIRED) + include(UseJava) + + set(CMAKE_JAVA_COMPILE_FLAGS "-source" "1.6" "-target" "1.6") +-set(CMAKE_JAVA_INCLUDE_PATH /usr/share/java/ij.jar) ++set(CMAKE_JAVA_INCLUDE_PATH /usr/share/java/ij.jar:/usr/share/java/json-simple.jar) + + # The name of an ImageJ plugin must contain an underscore + # http://imagejdocu.tudor.lu/doku.php?id=howto:plugins:howto_create_an_imagej_plugin_jar_file +@@ -19,20 +19,6 @@ add_jar(Orthanc_Import + ${CMAKE_SOURCE_DIR}/com/orthancserver/PreviewPanel.java + ${CMAKE_SOURCE_DIR}/com/orthancserver/SelectImageDialog.java + ${CMAKE_SOURCE_DIR}/com/orthancserver/HttpsTrustModifier.java +- +- # Sources of the "json-simple" toolkit +- ${CMAKE_SOURCE_DIR}/org/json/simple/ItemList.java +- ${CMAKE_SOURCE_DIR}/org/json/simple/JSONArray.java +- ${CMAKE_SOURCE_DIR}/org/json/simple/JSONAware.java +- ${CMAKE_SOURCE_DIR}/org/json/simple/JSONObject.java +- ${CMAKE_SOURCE_DIR}/org/json/simple/JSONStreamAware.java +- ${CMAKE_SOURCE_DIR}/org/json/simple/JSONValue.java +- ${CMAKE_SOURCE_DIR}/org/json/simple/parser/ContainerFactory.java +- ${CMAKE_SOURCE_DIR}/org/json/simple/parser/ContentHandler.java +- ${CMAKE_SOURCE_DIR}/org/json/simple/parser/JSONParser.java +- ${CMAKE_SOURCE_DIR}/org/json/simple/parser/ParseException.java +- ${CMAKE_SOURCE_DIR}/org/json/simple/parser/Yylex.java +- ${CMAKE_SOURCE_DIR}/org/json/simple/parser/Yytoken.java + ) + + # Add the "plugins.config" file that is expected by ImageJ in the JAR file diff --git a/debian/patches/series b/debian/patches/series new file mode 100644 index 0000000..33ce5e2 --- /dev/null +++ b/debian/patches/series @@ -0,0 +1 @@ +json-simple diff --git a/debian/rules b/debian/rules new file mode 100755 index 0000000..36e6248 --- /dev/null +++ b/debian/rules @@ -0,0 +1,19 @@ +#!/usr/bin/make -f + +JSON_SIMPLE_JAR = /usr/share/java/json-simple.jar + +%: + dh $@ --parallel --builddirectory=Build + +override_dh_auto_configure: + dh_auto_configure -- -DCMAKE_JAVA_INCLUDE_PATH=${JSON_SIMPLE_JAR} + +override_dh_auto_install: + dh_auto_install + dh_link ${JSON_SIMPLE_JAR} usr/share/imagej/plugins/Orthanc_Import_json-simple.jar + +override_dh_installchangelogs: + dh_installchangelogs -k NEWS + +get-orig-source: + uscan --verbose --force-download --repack --compression xz diff --git a/debian/source/format b/debian/source/format new file mode 100644 index 0000000..163aaf8 --- /dev/null +++ b/debian/source/format @@ -0,0 +1 @@ +3.0 (quilt) diff --git a/debian/upstream/metadata b/debian/upstream/metadata new file mode 100644 index 0000000..7cf8c15 --- /dev/null +++ b/debian/upstream/metadata @@ -0,0 +1,6 @@ +Reference: + Author: S. Jodogne and C. Bernard and M. Devillers and E. Lenaerts and P. Coucke + Title: "Orthanc -- A Lightweight, RESTful DICOM Server for Healthcare and Medical Research" + Type: book + Booktitle: Proc. of the International Symposium on Biomedical Imaging + Year: 2013 diff --git a/debian/watch b/debian/watch new file mode 100644 index 0000000..1407b5b --- /dev/null +++ b/debian/watch @@ -0,0 +1,3 @@ +version=3 +opts="repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g,downloadurlmangle=s/\/browse\.php\?path=//g,repack,compression=xz" \ +http://www.orthanc-server.com/browse.php?path=/imagej downloads/get\.php\?path=/imagej/OrthancImageJ-(\d\S*)\.tar\.gz -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/orthanc-imagej.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
