This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository python-cutadapt.
commit 614fb4da73e71e145e69a1707c53c1066f6e8f45 Merge: 01a0b97 250b0dc Author: Andreas Tille <[email protected]> Date: Mon Jun 20 15:26:00 2016 +0200 Merge tag 'upstream/1.10' Upstream version 1.10 CHANGES.rst | 22 + LICENSE | 2 +- PKG-INFO | 2 +- cutadapt/__init__.py | 2 +- cutadapt/__main__.py | 12 - cutadapt/_align.c | 4016 +++++++++--------------------------------- cutadapt/_align.pyx | 1 + cutadapt/_align.so | Bin 532496 -> 0 bytes cutadapt/_qualtrim.c | 743 ++++++-- cutadapt/_qualtrim.pyx | 36 + cutadapt/_qualtrim.so | Bin 92136 -> 0 bytes cutadapt/_seqio.c | 2320 ++++++++---------------- cutadapt/_seqio.pyx | 59 +- cutadapt/_seqio.so | Bin 397664 -> 0 bytes cutadapt/adapters.py | 264 ++- cutadapt/filters.py | 8 +- cutadapt/modifiers.py | 63 +- cutadapt/qualtrim.py | 31 +- cutadapt/report.py | 35 +- cutadapt/scripts/cutadapt.py | 214 +-- cutadapt/seqio.py | 413 +++-- cutadapt/xopen.py | 10 +- doc/colorspace.rst | 23 +- doc/conf.py | 2 +- doc/guide.rst | 59 +- doc/ideas.rst | 14 +- doc/installation.rst | 72 +- setup.py | 57 +- tests/cut/linked.fasta | 10 + tests/cut/nextseq.fastq | 8 + tests/cut/small.fasta | 6 + tests/data/linked.fasta | 10 + tests/data/nextseq.fastq | 8 + tests/testadapters.py | 43 +- tests/testpaired.py | 11 +- tests/testqualtrim.py | 14 + tests/tests.py | 30 +- tests/testseqio.py | 53 +- tests/utils.py | 2 +- 39 files changed, 3324 insertions(+), 5351 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/python-cutadapt.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
