This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository clustalo.
commit 9fe5d64754c9015ec9b5e04410f06e7762994745 Merge: 1589fe5 bacfc62 Author: Andreas Tille <[email protected]> Date: Mon Jul 4 11:14:49 2016 +0200 Merge tag 'upstream/1.2.2' Upstream version 1.2.2 Doxyfile | 2 +- INSTALL | 64 ++++ configure | 20 +- configure.ac | 6 +- src/clustal-omega-config.h | 10 +- src/clustal-omega.c | 78 ++++- src/clustal-omega.h | 2 + src/clustal/hhalign_wrapper.c | 171 ++++++++-- src/clustal/ktuple_pair.c | 8 +- src/clustal/mbed.c | 11 +- src/clustal/pair_dist.c | 38 ++- src/clustal/pair_dist.h | 6 +- src/clustal/seq.c | 106 ++++++- src/clustal/seq.h | 8 +- src/clustal/symmatrix.c | 48 ++- src/hhalign/hash-C.h | 6 +- src/hhalign/hhalign.cpp | 12 +- src/hhalign/hhalign.h | 4 +- src/hhalign/hhalignment-C.h | 687 ++++++++++++++++++++++++---------------- src/hhalign/hhfullalignment-C.h | 3 +- src/hhalign/hhfunc-C.h | 7 +- src/hhalign/hhhalfalignment-C.h | 3 +- src/hhalign/hhhit-C.h | 7 +- src/hhalign/hhhitlist-C.h | 8 +- src/hhalign/hhhmm-C.h | 3 +- src/hhalign/util-C.h | 3 +- src/mymain.c | 22 +- src/squid/a2m.c | 9 +- src/squid/msa.c | 78 ++++- src/squid/msa.h | 7 +- src/squid/sqio.c | 21 +- src/squid/squid.h | 3 + src/squid/stockholm.c | 99 +++++- 33 files changed, 1160 insertions(+), 400 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/clustalo.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
