This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository ncbi-vdb.
commit d2d468826a5979f836f84e3202df971dc17bf888 Author: Andreas Tille <[email protected]> Date: Wed Jul 20 16:57:31 2016 +0200 Refresh patches --- debian/patches/debug_configure.patch | 2 +- debian/patches/find_hdf5_serial.patch | 2 +- debian/patches/find_ngs-sdk.patch | 6 +++--- 3 files changed, 5 insertions(+), 5 deletions(-) diff --git a/debian/patches/debug_configure.patch b/debian/patches/debug_configure.patch index 15986ef..d6d2f34 100644 --- a/debian/patches/debug_configure.patch +++ b/debian/patches/debug_configure.patch @@ -5,7 +5,7 @@ Description: Force debugging output (--with-debug in d/rules is ignored --- a/setup/konfigure.perl +++ b/setup/konfigure.perl -@@ -426,6 +426,7 @@ if ($TOOLS =~ /gcc$/ && check_no_array_b +@@ -435,6 +435,7 @@ if ($TOOLS =~ /gcc$/) { my @dependencies; diff --git a/debian/patches/find_hdf5_serial.patch b/debian/patches/find_hdf5_serial.patch index e569f26..9fe7178 100644 --- a/debian/patches/find_hdf5_serial.patch +++ b/debian/patches/find_hdf5_serial.patch @@ -6,7 +6,7 @@ Description: use hdf5 serial --- a/setup/konfigure.perl +++ b/setup/konfigure.perl -@@ -1443,8 +1443,8 @@ sub check_compiler { +@@ -1485,8 +1485,8 @@ sub check_compiler { $flags = $n; $log = ' int main() { }\n' } elsif ($n eq 'hdf5') { diff --git a/debian/patches/find_ngs-sdk.patch b/debian/patches/find_ngs-sdk.patch index 3b5a2e7..0fb6ac3 100644 --- a/debian/patches/find_ngs-sdk.patch +++ b/debian/patches/find_ngs-sdk.patch @@ -4,7 +4,7 @@ Description: Enable finding ngs-sdk --- a/setup/konfigure.perl +++ b/setup/konfigure.perl -@@ -1285,7 +1285,9 @@ sub find_in_dir { +@@ -1310,7 +1310,9 @@ sub find_in_dir { print "\tlibraries... " unless ($AUTORUN); if ($lib) { my $builddir = File::Spec->catdir($dir, $OS, $TOOLS, $ARCH, $BUILD); @@ -15,7 +15,7 @@ Description: Enable finding ngs-sdk my $ilibdir = File::Spec->catdir($builddir, 'ilib'); my $f = File::Spec->catdir($libdir, $lib); print "\n\t\tchecking $f\n\t" if ($OPT{'debug'}); -@@ -1366,8 +1368,8 @@ sub find_in_dir { +@@ -1391,8 +1393,8 @@ sub find_in_dir { } } if ($jar) { @@ -28,7 +28,7 @@ Description: Enable finding ngs-sdk $found_lib = $try; --- a/setup/package.prl +++ b/setup/package.prl -@@ -31,8 +31,8 @@ sub REQ { ( { name => 'ngs-sdk', +@@ -30,8 +30,8 @@ sub REQ { ( { name => 'ngs-sdk', option => 'with-ngs-java-prefix', origin => 'I', type => 'JO', -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/ncbi-vdb.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
