This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository cufflinks.
commit e99e0f4fa7eb41b50058982b24cb5a09f21bdd77 Author: Andreas Tille <[email protected]> Date: Fri Aug 5 21:32:39 2016 +0200 use debian packaged liblemon --- debian/patches/series | 1 + debian/patches/use_debian_packaged_liblemon.patch | 56 +++++++++++++++++++++++ 2 files changed, 57 insertions(+) diff --git a/debian/patches/series b/debian/patches/series index 7f0e077..8a05716 100644 --- a/debian/patches/series +++ b/debian/patches/series @@ -5,3 +5,4 @@ gffread_show_usage.patch 0003-fix_includes_path.patch format-security.patch lib_eigen.patch +use_debian_packaged_liblemon.patch diff --git a/debian/patches/use_debian_packaged_liblemon.patch b/debian/patches/use_debian_packaged_liblemon.patch new file mode 100644 index 0000000..7e0fac0 --- /dev/null +++ b/debian/patches/use_debian_packaged_liblemon.patch @@ -0,0 +1,56 @@ +--- a/src/Makefile.am ++++ b/src/Makefile.am +@@ -54,44 +54,6 @@ noinst_HEADERS = \ + graph_optimize.h \ + jensen_shannon.h \ + sampling.h \ +- lemon/maps.h \ +- lemon/bin_heap.h \ +- lemon/fib_heap.h \ +- lemon/bipartite_matching.h \ +- lemon/topology.h \ +- lemon/bucket_heap.h \ +- lemon/smart_graph.h \ +- lemon/list_graph.h \ +- lemon/error.h \ +- lemon/graph_utils.h \ +- lemon/bfs.h \ +- lemon/dfs.h \ +- lemon/math.h \ +- lemon/tolerance.h \ +- lemon/graph_adaptor.h \ +- lemon/concept_check.h \ +- lemon/bits/default_map.h \ +- lemon/bits/array_map.h \ +- lemon/bits/vector_map.h \ +- lemon/bits/debug_map.h \ +- lemon/bits/map_extender.h \ +- lemon/bits/base_extender.h \ +- lemon/bits/graph_adaptor_extender.h \ +- lemon/bits/graph_extender.h \ +- lemon/bits/invalid.h \ +- lemon/bits/path_dump.h \ +- lemon/bits/traits.h \ +- lemon/bits/utility.h \ +- lemon/bits/alteration_notifier.h \ +- lemon/bits/variant.h \ +- lemon/concepts/graph.h \ +- lemon/concepts/bpugraph.h \ +- lemon/concepts/graph_components.h \ +- lemon/concepts/ugraph.h \ +- lemon/concepts/heap.h \ +- lemon/concepts/maps.h \ +- lemon/concepts/path.h \ +- lemon/concepts/matrix_maps.h \ + locfit/design.h \ + locfit/lfcons.h \ + locfit/lfstruc.h \ +@@ -206,7 +168,7 @@ CLEANFILES = $(bin_SCRIPTS) + # (echo '#!$(PYTHON)'; sed '/^#!/d' $<) > $@ + + cufflinks_SOURCES = cufflinks.cpp +-cufflinks_LDADD = libcufflinks.a libgc.a $(BOOST_THREAD_LIB) $(BOOST_SYSTEM_LIB) $(BOOST_SERIALIZATION_LIB) $(BAM_LIB) ++cufflinks_LDADD = libcufflinks.a libgc.a $(BOOST_THREAD_LIB) $(BOOST_SYSTEM_LIB) $(BOOST_SERIALIZATION_LIB) $(BAM_LIB) -llemon + cufflinks_LDFLAGS = $(LDFLAGS) $(BOOST_LDFLAGS) $(BAM_LDFLAGS) #$(ZLIB_LDFLAGS) + + cuffcompare_SOURCES = cuffcompare.cpp -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/cufflinks.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
