This is an automated email from the git hooks/post-receive script. tille pushed a change to branch master in repository last-align.
from 53dd487 New upstream version new 9dfdbad New upstream version 755 new 2be4b68 Merge tag 'upstream/755' new a7b0338 New upstream version new efc6116 New upstream version 759 new bb1b7f8 Merge tag 'upstream/759' new 43e919c New upstream version The 6 revisions listed above as "new" are entirely new to this repository and will be described in separate emails. The revisions listed as "adds" were already present in the repository and have only been added to this reference. Summary of changes: ChangeLog.txt | 46 +++++++++++++- debian/changelog | 12 ++++ doc/last-map-probs.html | 6 +- doc/last-map-probs.txt | 6 +- doc/last-pair-probs.html | 16 ++--- doc/last-pair-probs.txt | 16 ++--- doc/last-parallel.html | 4 +- doc/last-parallel.txt | 4 +- doc/last-split.html | 28 ++++---- doc/last-split.txt | 29 +++++---- doc/last-tuning.html | 37 ++++++----- doc/last-tuning.txt | 43 ++++++------- doc/last-tutorial.html | 129 ++++++++++++++++++------------------- doc/last-tutorial.txt | 130 +++++++++++++++++--------------------- doc/lastal.html | 107 +++++++++++++++---------------- doc/lastal.txt | 92 ++++++++++++++------------- doc/lastdb.html | 63 +++++++++--------- doc/lastdb.txt | 63 +++++++++--------- examples/last-bisulfite-paired.sh | 8 +-- examples/last-bisulfite.sh | 4 +- scripts/last-dotplot | 2 +- src/LastalArguments.cc | 48 +++++++------- src/LastdbArguments.cc | 12 ++-- src/gaplessPssmXdrop.cc | 39 ++++++++++++ src/gaplessPssmXdrop.hh | 7 ++ src/gaplessTwoQualityXdrop.cc | 46 ++++++++++++++ src/gaplessTwoQualityXdrop.hh | 11 ++++ src/gaplessXdrop.cc | 40 ++++++++++++ src/gaplessXdrop.hh | 15 +++++ src/lastal.cc | 69 +++++++++++++------- src/split/last-split-main.cc | 2 +- src/split/last-split.cc | 2 +- src/version.hh | 2 +- 33 files changed, 683 insertions(+), 455 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/last-align.git _______________________________________________ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit