This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository mauve-aligner.
commit 15a15b8079923ae7aac49aaba40b87d81458f872 Author: Andreas Tille <[email protected]> Date: Wed Dec 7 09:17:34 2016 +0100 Add mauve-contig-mover --- debian/bin/mauve-contig-mover | 21 +++++++++++++++++++++ 1 file changed, 21 insertions(+) diff --git a/debian/bin/mauve-contig-mover b/debian/bin/mauve-contig-mover new file mode 100755 index 0000000..0d985cf --- /dev/null +++ b/debian/bin/mauve-contig-mover @@ -0,0 +1,21 @@ +#!/bin/sh + +usage() { + echo "Usage: $0 -output OUTPUTDIR -ref REF -draft DRAFT" + exit 1 +} + +if ! echo $* | grep -- -output ; then + echo "Missing output dir specified by '-output DIR' ." + usage +fi +if ! echo $* | grep -- -ref ; then + echo "Missing reference specified by '-ref REF' ." + usage +fi +if ! echo $* | grep -- -draft ; then + echo "Missing draft genome specified by '-draft DRAFT' ." + usage +fi + +java -Xmx6g -cp /usr/share/java/Mauve.jar org.gel.mauve.contigs.ContigOrderer $* -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/mauve-aligner.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
