This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository cwltool.
commit 5d53951e0d3b6d1a279e00963105eed950edbcc1 Merge: 852d4a4 d2d28ba Author: Andreas Tille <[email protected]> Date: Fri Dec 9 10:29:21 2016 +0100 Updated version 1.0.20161207161158 from 'upstream/1.0.20161207161158' with Debian dir 2297dbb7767e4f89bc8e5f5d394924276adaeda7 MANIFEST.in | 2 +- Makefile | 161 ++ PKG-INFO | 44 +- README.rst | 38 +- cwltool.egg-info/PKG-INFO | 44 +- cwltool.egg-info/SOURCES.txt | 74 +- cwltool.egg-info/entry_points.txt | 1 - cwltool.egg-info/pbr.json | 1 + cwltool.egg-info/requires.txt | 13 +- cwltool/builder.py | 126 +- cwltool/cwlNodeEngine.js | 13 + cwltool/cwlrdf.py | 60 +- cwltool/cwltest.py | 210 --- cwltool/docker.py | 30 +- cwltool/docker_uid.py | 16 +- cwltool/draft2tool.py | 449 +++-- cwltool/errors.py | 3 + cwltool/expression.py | 240 ++- cwltool/factory.py | 21 +- cwltool/job.py | 365 +++- cwltool/load_tool.py | 250 +++ cwltool/main.py | 811 ++++---- cwltool/pack.py | 82 + cwltool/pathmapper.py | 264 ++- cwltool/process.py | 505 +++-- cwltool/resolver.py | 30 + cwltool/sandboxjs.py | 197 +- cwltool/schemas/draft-2/CommonWorkflowLanguage.yml | 1966 ++++++++++++++++++++ cwltool/schemas/draft-3/Process.yml | 20 +- cwltool/schemas/draft-3/README.md | 5 +- cwltool/schemas/draft-3/UserGuide.yml | 859 +++++++++ cwltool/schemas/draft-3/Workflow.yml | 4 +- .../salad/schema_salad/metaschema/metaschema.yml | 4 +- cwltool/schemas/draft-3/userguide-intro.md | 21 +- .../schemas/v1.0/CommandLineTool-standalone.yml | 2 + cwltool/schemas/v1.0/CommandLineTool.yml | 894 +++++++++ cwltool/schemas/v1.0/CommonWorkflowLanguage.yml | 11 + cwltool/schemas/v1.0/Process.yml | 743 ++++++++ cwltool/schemas/{draft-3 => v1.0}/README.md | 4 +- cwltool/schemas/v1.0/UserGuide.yml | 869 +++++++++ cwltool/schemas/{draft-3 => v1.0}/Workflow.yml | 313 +++- cwltool/schemas/v1.0/concepts.md | 388 ++++ cwltool/schemas/v1.0/contrib.md | 19 + cwltool/schemas/v1.0/intro.md | 21 + cwltool/schemas/v1.0/invocation.md | 153 ++ .../salad/schema_salad/metaschema/field_name.yml | 46 + .../schema_salad/metaschema/field_name_proc.yml | 8 + .../schema_salad/metaschema/field_name_schema.yml | 14 + .../schema_salad/metaschema/field_name_src.yml | 8 + .../salad/schema_salad/metaschema/ident_res.yml | 53 + .../schema_salad/metaschema/ident_res_proc.yml | 20 + .../schema_salad/metaschema/ident_res_schema.yml | 14 + .../schema_salad/metaschema/ident_res_src.yml | 20 + .../schema_salad/metaschema/import_include.md | 176 ++ .../salad/schema_salad/metaschema/link_res.yml | 55 + .../schema_salad/metaschema/link_res_proc.yml | 21 + .../schema_salad/metaschema/link_res_schema.yml | 16 + .../salad/schema_salad/metaschema/link_res_src.yml | 21 + .../salad/schema_salad/metaschema/metaschema.yml | 270 +-- .../schema_salad/metaschema/metaschema_base.yml | 164 ++ .../v1.0/salad/schema_salad/metaschema/salad.md | 256 +++ .../salad/schema_salad/metaschema/vocab_res.yml | 35 + .../schema_salad/metaschema/vocab_res_proc.yml | 15 + .../schema_salad/metaschema/vocab_res_schema.yml | 21 + .../schema_salad/metaschema/vocab_res_src.yml | 15 + cwltool/schemas/v1.0/userguide-intro.md | 28 + .../v1.1.0-dev1/CommandLineTool-standalone.yml | 2 + cwltool/schemas/v1.1.0-dev1/CommandLineTool.yml | 948 ++++++++++ .../schemas/v1.1.0-dev1/CommonWorkflowLanguage.yml | 11 + cwltool/schemas/v1.1.0-dev1/Process.yml | 749 ++++++++ cwltool/schemas/{draft-3 => v1.1.0-dev1}/README.md | 4 +- cwltool/schemas/v1.1.0-dev1/UserGuide.yml | 869 +++++++++ .../schemas/{draft-3 => v1.1.0-dev1}/Workflow.yml | 328 ++-- cwltool/schemas/v1.1.0-dev1/concepts.md | 389 ++++ cwltool/schemas/v1.1.0-dev1/contrib.md | 19 + cwltool/schemas/v1.1.0-dev1/intro.md | 21 + cwltool/schemas/v1.1.0-dev1/invocation.md | 153 ++ .../salad/schema_salad/metaschema/field_name.yml | 46 + .../schema_salad/metaschema/field_name_proc.yml | 8 + .../schema_salad/metaschema/field_name_schema.yml | 14 + .../schema_salad/metaschema/field_name_src.yml | 8 + .../salad/schema_salad/metaschema/ident_res.yml | 53 + .../schema_salad/metaschema/ident_res_proc.yml | 20 + .../schema_salad/metaschema/ident_res_schema.yml | 14 + .../schema_salad/metaschema/ident_res_src.yml | 20 + .../schema_salad/metaschema/import_include.md | 176 ++ .../salad/schema_salad/metaschema/link_res.yml | 55 + .../schema_salad/metaschema/link_res_proc.yml | 21 + .../schema_salad/metaschema/link_res_schema.yml | 16 + .../salad/schema_salad/metaschema/link_res_src.yml | 21 + .../salad/schema_salad/metaschema/metaschema.yml | 270 +-- .../schema_salad/metaschema/metaschema_base.yml | 164 ++ .../salad/schema_salad/metaschema/salad.md | 256 +++ .../salad/schema_salad/metaschema/vocab_res.yml | 35 + .../schema_salad/metaschema/vocab_res_proc.yml | 15 + .../schema_salad/metaschema/vocab_res_schema.yml | 21 + .../schema_salad/metaschema/vocab_res_src.yml | 15 + cwltool/schemas/v1.1.0-dev1/userguide-intro.md | 28 + cwltool/stdfsaccess.py | 30 +- cwltool/update.py | 291 ++- cwltool/utils.py | 2 +- cwltool/workflow.py | 413 ++-- ez_setup.py | 259 ++- setup.cfg | 5 +- setup.py | 37 +- 105 files changed, 15030 insertions(+), 2398 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/cwltool.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
