Author: tille Date: 2017-01-10 08:39:25 +0000 (Tue, 10 Jan 2017) New Revision: 23550
Added: trunk/packages/R/r-bioc-phyloseq/trunk/debian/patches/ trunk/packages/R/r-bioc-phyloseq/trunk/debian/patches/fix_r-cran-ade4_versioning.patch trunk/packages/R/r-bioc-phyloseq/trunk/debian/patches/series Modified: trunk/packages/R/r-bioc-phyloseq/trunk/debian/changelog Log: Fix versioned depends from r-cran-ade4 Modified: trunk/packages/R/r-bioc-phyloseq/trunk/debian/changelog =================================================================== --- trunk/packages/R/r-bioc-phyloseq/trunk/debian/changelog 2017-01-09 16:20:25 UTC (rev 23549) +++ trunk/packages/R/r-bioc-phyloseq/trunk/debian/changelog 2017-01-10 08:39:25 UTC (rev 23550) @@ -1,3 +1,10 @@ +r-bioc-phyloseq (1.19.1-2) unstable; urgency=medium + + * Fix versioned depends from r-cran-ade4 + Closes: #850767 + + -- Andreas Tille <[email protected]> Tue, 10 Jan 2017 09:31:39 +0100 + r-bioc-phyloseq (1.19.1-1) unstable; urgency=medium * New upstream version Added: trunk/packages/R/r-bioc-phyloseq/trunk/debian/patches/fix_r-cran-ade4_versioning.patch =================================================================== --- trunk/packages/R/r-bioc-phyloseq/trunk/debian/patches/fix_r-cran-ade4_versioning.patch (rev 0) +++ trunk/packages/R/r-bioc-phyloseq/trunk/debian/patches/fix_r-cran-ade4_versioning.patch 2017-01-10 08:39:25 UTC (rev 23550) @@ -0,0 +1,21 @@ +Author: Andreas Tille <[email protected]> +Last-Update: Tue, 10 Jan 2017 08:53:44 +0100 +Description: Phyloseq upstream does not distinguish between '.' and '-' in + version specification. Due to automatic calculation of dependencies via + ${R:Depends} the wrongly versioned relation to r-cran-ade4 ends up in the + control information of the package. This patch fixes the relation. + . + See + https://lists.alioth.debian.org/pipermail/debian-med-packaging/2016-November/047737.html + +--- a/DESCRIPTION ++++ b/DESCRIPTION +@@ -10,7 +10,7 @@ Author: Paul J. McMurdie <joey711@gmail. + Susan Holmes <[email protected]>, with + contributions from Gregory Jordan and Scott Chamberlain + License: AGPL-3 +-Imports: BiocGenerics (>= 0.18.0), ade4 (>= 1.7.4), ape (>= 3.4), ++Imports: BiocGenerics (>= 0.18.0), ade4 (>= 1.7-4), ape (>= 3.4), + biomformat (>= 1.0.0), Biostrings (>= 2.40.0), cluster (>= + 2.0.4), data.table (>= 1.9.6), foreach (>= 1.4.3), ggplot2 (>= + 2.1.0), igraph (>= 1.0.1), methods (>= 3.3.0), multtest (>= Added: trunk/packages/R/r-bioc-phyloseq/trunk/debian/patches/series =================================================================== --- trunk/packages/R/r-bioc-phyloseq/trunk/debian/patches/series (rev 0) +++ trunk/packages/R/r-bioc-phyloseq/trunk/debian/patches/series 2017-01-10 08:39:25 UTC (rev 23550) @@ -0,0 +1 @@ +fix_r-cran-ade4_versioning.patch _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
