This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository libseqlib.
commit 36f17da62698af4dc7f25eb183c383bc78b7c9b1 Author: Andreas Tille <[email protected]> Date: Sun Jun 18 10:20:03 2017 +0200 Explicitly add -I/usr/include --- debian/changelog | 1 + debian/patches/dynamic_lib.patch | 2 +- debian/patches/use_debian_packaged_jsoncpp.patch | 4 ++-- debian/patches/use_debian_packaged_ssw.patch | 2 +- 4 files changed, 5 insertions(+), 4 deletions(-) diff --git a/debian/changelog b/debian/changelog index 7dc6eff..7ad7d68 100644 --- a/debian/changelog +++ b/debian/changelog @@ -1,6 +1,7 @@ libseqlib (1.1.1+dfsg-2) UNRELEASED; urgency=medium * Build-Depends: liblzma-dev + * Explicitly add -I/usr/include -- Andreas Tille <[email protected]> Sat, 17 Jun 2017 23:57:50 +0200 diff --git a/debian/patches/dynamic_lib.patch b/debian/patches/dynamic_lib.patch index e3f5205..0917c5c 100644 --- a/debian/patches/dynamic_lib.patch +++ b/debian/patches/dynamic_lib.patch @@ -9,7 +9,7 @@ Description: Create dynamic library +lib_LTLIBRARIES = libseqlib.la -libseqlib_a_CPPFLAGS = -I../ -I../htslib -I/usr/include/fml -Wno-sign-compare -+libseqlib_la_CPPFLAGS = `pkg-config --cflags htslib` -I/usr/include/fml -Wno-sign-compare ++libseqlib_la_CPPFLAGS = -I/usr/include `pkg-config --cflags htslib` -I/usr/include/fml -Wno-sign-compare -libseqlib_a_SOURCES = FastqReader.cpp BFC.cpp ReadFilter.cpp SeqPlot.cpp jsoncpp.cpp ssw_cpp.cpp ssw.c \ +libseqlib_la_SOURCES = FastqReader.cpp BFC.cpp ReadFilter.cpp SeqPlot.cpp jsoncpp.cpp ssw_cpp.cpp ssw.c \ diff --git a/debian/patches/use_debian_packaged_jsoncpp.patch b/debian/patches/use_debian_packaged_jsoncpp.patch index 9433063..f9ef394 100644 --- a/debian/patches/use_debian_packaged_jsoncpp.patch +++ b/debian/patches/use_debian_packaged_jsoncpp.patch @@ -7,8 +7,8 @@ Description: Do not use code copy of jsoncpp @@ -1,8 +1,8 @@ lib_LTLIBRARIES = libseqlib.la --libseqlib_la_CPPFLAGS = `pkg-config --cflags htslib` -I/usr/include/fml -Wno-sign-compare -+libseqlib_la_CPPFLAGS = `pkg-config --cflags htslib` -I/usr/include/fml `pkg-config --cflags jsoncpp` -Wno-sign-compare +-libseqlib_la_CPPFLAGS = -I/usr/include `pkg-config --cflags htslib` -I/usr/include/fml -Wno-sign-compare ++libseqlib_la_CPPFLAGS = -I/usr/include `pkg-config --cflags htslib` -I/usr/include/fml `pkg-config --cflags jsoncpp` -Wno-sign-compare -libseqlib_la_SOURCES = FastqReader.cpp BFC.cpp ReadFilter.cpp SeqPlot.cpp jsoncpp.cpp ssw_cpp.cpp ssw.c \ +libseqlib_la_SOURCES = FastqReader.cpp BFC.cpp ReadFilter.cpp SeqPlot.cpp ssw_cpp.cpp ssw.c \ diff --git a/debian/patches/use_debian_packaged_ssw.patch b/debian/patches/use_debian_packaged_ssw.patch index d67b079..3912174 100644 --- a/debian/patches/use_debian_packaged_ssw.patch +++ b/debian/patches/use_debian_packaged_ssw.patch @@ -14,7 +14,7 @@ Description: Do not use code copy of libssw +++ b/src/Makefile.am @@ -2,7 +2,7 @@ lib_LTLIBRARIES = libseqlib.la - libseqlib_la_CPPFLAGS = `pkg-config --cflags htslib` -I/usr/include/fml `pkg-config --cflags jsoncpp` -Wno-sign-compare + libseqlib_la_CPPFLAGS = -I/usr/include `pkg-config --cflags htslib` -I/usr/include/fml `pkg-config --cflags jsoncpp` -Wno-sign-compare -libseqlib_la_SOURCES = FastqReader.cpp BFC.cpp ReadFilter.cpp SeqPlot.cpp ssw_cpp.cpp ssw.c \ +libseqlib_la_SOURCES = FastqReader.cpp BFC.cpp ReadFilter.cpp SeqPlot.cpp \ -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/libseqlib.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
