This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch debian/jessie-backports in repository subread.
commit 619673380d8744f4561c92faa1fd31e1b42065a8 Merge: 791782a b750d4a Author: Andreas Tille <[email protected]> Date: Sun Jun 25 09:47:04 2017 +0200 Merge tag 'debian/1.5.1+dfsg-4' into debian/jessie-backports annotation/hg38_RefSeq_exon.txt | 261753 +++++++++++++++++++++++ debian/README.source | 6 - debian/changelog | 45 + debian/compat | 2 +- debian/control | 2 +- debian/copyright | 2 +- debian/patches/arch_specific_flags.patch | 6 +- debian/patches/fix_ftbfs_kfreebsd.patch | 4 +- debian/patches/series | 1 - debian/patches/syntax_err.patch | 13 - debian/rules | 15 +- debian/watch | 4 +- doc/SubreadUsersGuide.tex | 143 +- src/Makefile | 2 +- src/Makefile.FreeBSD | 2 +- src/Makefile.Linux | 2 +- src/Makefile.MacOS | 2 +- src/SNPCalling.c | 8 +- src/core-indel.c | 38 +- src/core-interface-aligner.c | 5 + src/core-interface-subjunc.c | 6 + src/core-junction.c | 2 +- src/core.c | 86 +- src/core.h | 5 +- src/gene-value-index.c | 5 +- src/input-files.c | 54 +- src/input-files.h | 2 + src/interval_merge.c | 24 +- src/makefile.version | 2 +- src/readSummary.c | 1166 +- test/featureCounts/data/corner-MinOverlap.ora | 8 +- test/featureCounts/data/corner-fractions.SAF | 5 + test/featureCounts/data/corner-fractions.ora | 3 + test/featureCounts/data/corner-fractions.sam | 7 + test/featureCounts/data/test-fracOverlap.ora | 4 + test/featureCounts/data/test-fracOverlap.sam | 4 + test/featureCounts/test_corner_cases.sh | 8 +- 37 files changed, 262940 insertions(+), 506 deletions(-) diff --cc debian/changelog index b844f6a,f907ec7..8ce18fd --- a/debian/changelog +++ b/debian/changelog @@@ -1,9 -1,48 +1,54 @@@ + subread (1.5.1+dfsg-4) unstable; urgency=medium + + * Fix watch file + * debhelper 10 + * remove outdated information from README.source + + -- Andreas Tille <[email protected]> Fri, 02 Dec 2016 08:22:05 +0100 + + subread (1.5.1+dfsg-3) unstable; urgency=medium + + * Pass triplet-prefixed CC to make + + -- Alexandre Mestiashvili <[email protected]> Mon, 05 Sep 2016 14:59:37 +0200 + + subread (1.5.1+dfsg-2) unstable; urgency=medium + + * Team upload. + * Make build reproducible. + - Add compiler flags to ensure use of -fdebug-prefix-map. + + -- Sascha Steinbiss <[email protected]> Sun, 04 Sep 2016 15:16:33 +0000 + + subread (1.5.1+dfsg-1) unstable; urgency=medium + + * Imported Upstream version 1.5.1+dfsg + * Fix copyright Format: s/http/https/ + * Refresh and remove applied patches + + -- Alexandre Mestiashvili <[email protected]> Sun, 28 Aug 2016 08:43:33 +0200 + + subread (1.5.0-p3+dfsg-3) unstable; urgency=medium + + * Team upload. + * Further address reproducibility by forcing mode on tarball contents. + + -- Sascha Steinbiss <[email protected]> Thu, 21 Jul 2016 13:23:14 +0000 + + subread (1.5.0-p3+dfsg-2) unstable; urgency=medium + + * Team upload. + * Make build reproducible by ensuring umask and mtime of + archive contents are deterministic. + + -- Sascha Steinbiss <[email protected]> Mon, 18 Jul 2016 07:46:12 +0000 + +subread (1.5.0-p3+dfsg-1~bpo8+1) jessie-backports; urgency=medium + + * Rebuild for jessie-backports. + + -- Andreas Tille <[email protected]> Mon, 20 Jun 2016 09:45:35 +0200 + subread (1.5.0-p3+dfsg-1) unstable; urgency=medium * Drop get-orig-source target, update d/watch to repack and use compression xz -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/subread.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
