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tille pushed a change to branch master
in repository r-bioc-gviz.
from 9b398ab Moved packaging from SVN to Git
new 283e7b2 New upstream version 1.20.0
new 48e7ed7 Updated version 1.20.0 from 'upstream/1.20.0'
new fc4032a New upstream version
new 7187105 Standards-Version: 4.1.0 (no changes needed)
new 43ea7bb Upload to unstable
The 5 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
DESCRIPTION | 4 +-
NAMESPACE | 6 +
NEWS | 13 +
R/AllClasses.R | 46 +-
R/Gviz-methods.R | 32 +-
R/Gviz.R | 7 +-
Rplots.pdf | Bin 3611 -> 3611 bytes
build/vignette.rds | Bin 225 -> 224 bytes
debian/changelog | 6 +-
debian/control | 2 +-
inst/doc/Gviz.R | 2 +-
inst/doc/Gviz.Rnw | 4 +-
inst/doc/Gviz.pdf | Bin 1454409 -> 1498771 bytes
inst/extdata/biomartVersionsLatest.txt | 2 +-
inst/extdata/biomartVersionsNow.txt | 2 +-
inst/scripts/documentation.R | 2 +
man/AlignedReadTrack-class.Rd | 712 +++++------
man/AlignmentsTrack-class.Rd | 3 +
man/AnnotationTrack-class.Rd | 5 +-
man/BiomartGeneRegionTrack-class.Rd | 400 +++---
man/CustomTrack-class.Rd | 8 +-
man/DataTrack-class.Rd | 230 ++--
man/DisplayPars-class.Rd | 1 +
man/GdObject-class.Rd | 3 +
man/GeneRegionTrack-class.Rd | 5 +-
man/GenomeAxisTrack-class.Rd | 474 ++++----
man/HighlightTrack-class.Rd | 5 +-
man/IdeogramTrack-class.Rd | 120 +-
man/ImageMap-class.Rd | 1 +
man/NumericTrack-class.Rd | 1 +
man/OverlayTrack-class.Rd | 5 +-
man/RangeTrack-class.Rd | 558 ++++-----
man/ReferenceTrack-class.Rd | 1 +
man/SequenceTrack-class.Rd | 11 +-
man/StackedTrack-class.Rd | 600 ++++-----
man/UcscTrack.Rd | 1 +
man/collapsing.Rd | 1 +
man/datasets.Rd | 1 +
man/exportTracks.Rd | 1 +
man/grouping.Rd | 1 +
man/plotTracks.Rd | 1 +
man/settings.Rd | 2089 ++++++++++++++++++++------------
vignettes/Gviz.Rnw | 4 +-
43 files changed, 3056 insertions(+), 2314 deletions(-)
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