This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository r-cran-etm.
commit 3f9aa2a6f0893d62038c56989fb06af029e57091 Author: Andreas Tille <[email protected]> Date: Thu Sep 24 12:02:13 2015 +0000 inject r-cran-etm --- debian/README.test | 8 ++++++++ debian/changelog | 5 +++++ debian/compat | 1 + debian/control | 25 +++++++++++++++++++++++++ debian/copyright | 30 ++++++++++++++++++++++++++++++ debian/docs | 3 +++ debian/rules | 3 +++ debian/source/format | 1 + debian/tests/control | 3 +++ debian/tests/run-unit-test | 23 +++++++++++++++++++++++ debian/watch | 2 ++ 11 files changed, 104 insertions(+) diff --git a/debian/README.test b/debian/README.test new file mode 100644 index 0000000..55a9142 --- /dev/null +++ b/debian/README.test @@ -0,0 +1,8 @@ +Notes on how this package can be tested. +──────────────────────────────────────── + +To run the unit tests provided by the package you can do + + sh run-unit-test + +in this directory. diff --git a/debian/changelog b/debian/changelog new file mode 100644 index 0000000..f5e20df --- /dev/null +++ b/debian/changelog @@ -0,0 +1,5 @@ +r-cran-etm (0.6-2-1) UNRELEASED; urgency=low + + * Initial release (closes: #???) + + -- Andreas Tille <[email protected]> Thu, 24 Sep 2015 09:59:03 +0200 diff --git a/debian/compat b/debian/compat new file mode 100644 index 0000000..ec63514 --- /dev/null +++ b/debian/compat @@ -0,0 +1 @@ +9 diff --git a/debian/control b/debian/control new file mode 100644 index 0000000..27b77e0 --- /dev/null +++ b/debian/control @@ -0,0 +1,25 @@ +Source: r-cran-etm +Maintainer: Debian Med Packaging Team <[email protected]> +Uploaders: Andreas Tille <[email protected]> +Section: gnu-r +Testsuite: autopkgtest +Priority: optional +Build-Depends: debhelper (>= 9), + cdbs, + r-base-dev, + r-cran-lattice, + r-cran-survival +Standards-Version: 3.9.6 +Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-cran-etm/trunk/ +Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-cran-etm/trunk/ +Homepage: https://cran.r-project.org/web/packages/etm/ + +Package: r-cran-etm +Architecture: any +Depends: ${shlibs:Depends}, + ${R:Depends}, + r-cran-lattice, + r-cran-survival +Description: GNU R empirical transition matrix + This GNU R package provides matrix of transition probabilities for any + time-inhomogeneous multistate model with finite state space. diff --git a/debian/copyright b/debian/copyright new file mode 100644 index 0000000..4cb11c2 --- /dev/null +++ b/debian/copyright @@ -0,0 +1,30 @@ +Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Upstream-Name: etm +Upstream-Contact: Arthur Allignol <[email protected]> +Source: http://cran.r-project.org/src/contrib/ + +Files: * +Copyright: 2008-2014 Arthur Allignol <[email protected]> +License: GPL-2+ + +Files: debian/* +Copyright: 2015 Andreas Tille <[email protected]> +License: GPL-2+ + +License: GPL-2+ + This program is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 2 of the License, or + (at your option) any later version. + . + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + . + You should have received a copy of the GNU General Public License + along with this program. If not, see <http://www.gnu.org/licenses/>. + . + On Debian systems, the complete text of the GNU General Public + License can be found in `/usr/share/common-licenses/GPL'. + diff --git a/debian/docs b/debian/docs new file mode 100644 index 0000000..3adf0d6 --- /dev/null +++ b/debian/docs @@ -0,0 +1,3 @@ +debian/README.test +debian/tests/run-unit-test +tests diff --git a/debian/rules b/debian/rules new file mode 100755 index 0000000..2fbba2d --- /dev/null +++ b/debian/rules @@ -0,0 +1,3 @@ +#!/usr/bin/make -f + +include /usr/share/R/debian/r-cran.mk diff --git a/debian/source/format b/debian/source/format new file mode 100644 index 0000000..163aaf8 --- /dev/null +++ b/debian/source/format @@ -0,0 +1 @@ +3.0 (quilt) diff --git a/debian/tests/control b/debian/tests/control new file mode 100644 index 0000000..d2aa55a --- /dev/null +++ b/debian/tests/control @@ -0,0 +1,3 @@ +Tests: run-unit-test +Depends: @ +Restrictions: allow-stderr diff --git a/debian/tests/run-unit-test b/debian/tests/run-unit-test new file mode 100644 index 0000000..c27a190 --- /dev/null +++ b/debian/tests/run-unit-test @@ -0,0 +1,23 @@ +#!/bin/sh -e + +pkg=r-cran-cmprsk + +if [ "$ADTTMP" = "" ] ; then + ADTTMP=`mktemp -d /tmp/${pkg}-test.XXXXXX` +fi +cd $ADTTMP +cp /usr/share/doc/${pkg}/tests/* $ADTTMP +find . -name "*.gz" -exec gunzip \{\} \; +for htest in `ls *.R | sed 's/\.R$//'` ; do + LC_ALL=C R --no-save < ${htest}.R 2>&1 | tee > ${htest}.Rout + diff -u ${htest}.Rout.save ${htest}.Rout + if [ ! $? ] ; then + echo "Test ${htest} failed" + exit 1 + else + echo "Test ${htest} passed" + fi +done +rm -f $ADTTMP/* + +exit 0 diff --git a/debian/watch b/debian/watch new file mode 100644 index 0000000..29459fb --- /dev/null +++ b/debian/watch @@ -0,0 +1,2 @@ +version=3 +http://cran.r-project.org/src/contrib/etm_([-\d.]*)\.tar\.gz -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/r-cran-etm.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
