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commit 85c6bffeb3d9443e21bed0b4df88cfa795962a17 Merge: d17d95b 75cf31d Author: Andreas Tille <[email protected]> Date: Wed Oct 25 14:49:39 2017 +0200 Updated version 4.44.1+dfsg from 'upstream/4.44.1+dfsg' with Debian dir 062669573f61c415ac1a09262d95e1657a010d93 gbtools/src/blatSrc/Makefile.am | 277 -- gbtools/src/blatSrc/Makefile.in | 2688 ------------ gbtools/src/blatSrc/lib/aliType.c | 33 - gbtools/src/blatSrc/lib/annoAssembly.c | 77 - gbtools/src/blatSrc/lib/annoFilter.c | 357 -- gbtools/src/blatSrc/lib/annoFormatTab.c | 230 - gbtools/src/blatSrc/lib/annoFormatter.c | 29 - gbtools/src/blatSrc/lib/annoGrateWig.c | 112 - gbtools/src/blatSrc/lib/annoGrator.c | 291 -- gbtools/src/blatSrc/lib/annoGratorQuery.c | 150 - gbtools/src/blatSrc/lib/annoOption.c | 100 - gbtools/src/blatSrc/lib/annoRow.c | 73 - gbtools/src/blatSrc/lib/annoStreamBigBed.c | 251 -- gbtools/src/blatSrc/lib/annoStreamBigWig.c | 185 - gbtools/src/blatSrc/lib/annoStreamTab.c | 236 - gbtools/src/blatSrc/lib/annoStreamVcf.c | 368 -- gbtools/src/blatSrc/lib/annoStreamer.c | 154 - 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gbtools/src/include/blatSrc/repMask.h | 56 - gbtools/src/include/blatSrc/rle.h | 16 - gbtools/src/include/blatSrc/rnautil.h | 55 - gbtools/src/include/blatSrc/rql.h | 130 - gbtools/src/include/blatSrc/rudp.h | 175 - gbtools/src/include/blatSrc/scoreWindow.h | 7 - gbtools/src/include/blatSrc/seg.h | 109 - gbtools/src/include/blatSrc/seqOut.h | 91 - gbtools/src/include/blatSrc/seqStats.h | 11 - gbtools/src/include/blatSrc/shaRes.h | 45 - gbtools/src/include/blatSrc/sig.h | 101 - gbtools/src/include/blatSrc/slog.h | 18 - gbtools/src/include/blatSrc/snof.h | 60 - gbtools/src/include/blatSrc/snofmake.h | 35 - gbtools/src/include/blatSrc/spaceSaver.h | 65 - gbtools/src/include/blatSrc/spacedColumn.h | 46 - gbtools/src/include/blatSrc/spacedSeed.h | 19 - gbtools/src/include/blatSrc/splatAli.h | 80 - gbtools/src/include/blatSrc/splix.h | 80 - gbtools/src/include/blatSrc/sqlList.h | 142 - gbtools/src/include/blatSrc/sqlNum.h | 83 - gbtools/src/include/blatSrc/subText.h | 41 - gbtools/src/include/blatSrc/sufa.h | 60 - gbtools/src/include/blatSrc/sufx.h | 64 - gbtools/src/include/blatSrc/supStitch.h | 73 - gbtools/src/include/blatSrc/synQueue.h | 38 - gbtools/src/include/blatSrc/tabRow.h | 45 - gbtools/src/include/blatSrc/textOut.h | 48 - gbtools/src/include/blatSrc/tokenizer.h | 66 - gbtools/src/include/blatSrc/trans3.h | 59 - gbtools/src/include/blatSrc/trix.h | 48 - gbtools/src/include/blatSrc/twoBit.h | 209 - gbtools/src/include/blatSrc/udc.h | 165 - gbtools/src/include/blatSrc/unfin.h | 31 - gbtools/src/include/blatSrc/userApp.mk | 49 - gbtools/src/include/blatSrc/vGfx.h | 193 - gbtools/src/include/blatSrc/vcf.h | 297 -- gbtools/src/include/blatSrc/vcfBits.h | 158 - gbtools/src/include/blatSrc/verbose.h | 53 - gbtools/src/include/blatSrc/wormdna.h | 245 -- gbtools/src/include/blatSrc/xAli.h | 73 - gbtools/src/include/blatSrc/xa.h | 63 - gbtools/src/include/blatSrc/xap.h | 78 - gbtools/src/include/blatSrc/xenalign.h | 41 - gbtools/src/include/blatSrc/xmlEscape.h | 17 - gbtools/src/include/blatSrc/xp.h | 78 - gbtools/src/include/blatSrc/zlibFace.h | 26 - gbtools/src/include/json/json-forwards.h | 319 -- gbtools/src/include/json/json.h | 2241 ---------- gbtools/src/jsoncpp/Makefile.am | 15 - gbtools/src/jsoncpp/Makefile.in | 723 ---- gbtools/src/jsoncpp/jsoncpp.cpp | 5247 ----------------------- 447 files changed, 120385 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/seqtools.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
