This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository bagpipe.
commit 37b5a3b5d47f8774337cd72f64b83e3032dac8ae Author: Andreas Tille <[email protected]> Date: Tue Jan 3 08:17:53 2017 +0000 Normalised packaging and moved citation from long description to upstream/metadata --- debian/compat | 2 +- debian/control | 26 ++++++++++---------------- debian/copyright | 2 +- debian/upstream/metadata | 22 ++++++++++++++++++++++ 4 files changed, 34 insertions(+), 18 deletions(-) diff --git a/debian/compat b/debian/compat index ec63514..f599e28 100644 --- a/debian/compat +++ b/debian/compat @@ -1 +1 @@ -9 +10 diff --git a/debian/control b/debian/control index 6e0f87e..1df20f2 100644 --- a/debian/control +++ b/debian/control @@ -1,17 +1,20 @@ Source: bagpipe -Section: science -Priority: optional Maintainer: Debian Med Packaging Team <[email protected]> Uploaders: Thorsten Alteholz <[email protected]> -Build-Depends: debhelper (>= 9) -Standards-Version: 3.9.4 +Section: science +Priority: optional +Build-Depends: debhelper (>= 10) +Standards-Version: 3.9.8 +Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/bagpipe/trunk/ +Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/bagpipe/trunk/ Homepage: http://valdarlab.unc.edu/software/bagpipe/_build/html/bagpipe.html -Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/bagpipe/trunk/ -Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/bagpipe/trunk/ Package: bagpipe Architecture: all -Depends: ${shlibs:Depends}, ${misc:Depends}, ${perl:Depends}, r-other-valdar-bagpipe.backend +Depends: ${shlibs:Depends}, + ${misc:Depends}, + ${perl:Depends}, + r-other-valdar-bagpipe.backend Description: genomewide LD mapping Bagpipe is a program for performing genomewide linkage disequilibrium mapping of quantitative trait loci in populations whose genome structure @@ -34,12 +37,3 @@ Description: genomewide LD mapping heterogeneous stock mice in [Valdar06]. * Bagpipe is experimental software, is provided free of charge subject to copyleft restrictions, and comes with no guarantees whatsoever. - . - [Mott00] Mott R, Talbot CJ, Turri MG, Collins AC, Flint, J (2000) - A method for fine mapping quantitative trait loci in outbred animal - stocks. Proceedings of the National Academy of Sciences of the United - States of America, 97(23), 12649-54. - [Valdar06] Valdar W, Solberg LC, Gaugier D, Burnett S, Klenerman P, - Cookson WO, Taylor M, Rawlins JNP, Mott R, Flint J (2006) - Genome-wide genetic association of complex traits in outbred mice. - Nature Genetics 38(8):879-87. PMID:16832355 diff --git a/debian/copyright b/debian/copyright index 9a1044f..91260ff 100644 --- a/debian/copyright +++ b/debian/copyright @@ -1,4 +1,4 @@ -Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: bagpipe Source: http://valdarlab.unc.edu/software/bagpipe/_build/html/bagpipe.html diff --git a/debian/upstream/metadata b/debian/upstream/metadata new file mode 100644 index 0000000..ee49be8 --- /dev/null +++ b/debian/upstream/metadata @@ -0,0 +1,22 @@ +Reference: + - Author: Richard Mott and Christopher J. Talbot and Maria G. Turri and Allan C. Collins and Jonathan Flint + Title: "A method for fine mapping quantitative trait loci in outbred animal stocks" + Journal: Proc Natl Acad Sci U S A. + Year: 2000 + Volume: 97 + Number: 23 + Pages: 12649-54 + DOI: 10.1073/pnas.230304397 + PMID: 11050180 + URL: http://www.pnas.org/content/97/23/12649 + - Author: William Valdar and Leah C Solberg and Dominique Gauguier and Stephanie Burnett and Paul Klenerman and William O Cookson and Martin S Taylor and J Nicholas P Rawlins and Richard Mott and Jonathan Flint + Title: "Genome-wide genetic association of complex traits in heterogeneous stock mice" + Journal: Nature Genetic + Year: 2006 + Volume: 38 + Number: 8 + Pages: 879-87 + DOI: 10.1038/ng1840 + PMID: 16832355 + URL: http://www.nature.com/ng/journal/v38/n8/full/ng1840.html + eprint: http://www.nature.com/ng/journal/v38/n8/pdf/ng1840.pdf -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/bagpipe.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
