This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository mcl.
commit aaf9ea13ad72e4d328b2f46a13ba8e7ace3272ea Author: Andreas Tille <[email protected]> Date: Mon Jan 22 13:00:46 2018 +0100 Fix further spelling issues --- debian/changelog | 1 + debian/patches/spelling.patch | 64 +++++++++++++++++++++++++++++++++++++++++++ 2 files changed, 65 insertions(+) diff --git a/debian/changelog b/debian/changelog index d73c3de..8f35a97 100644 --- a/debian/changelog +++ b/debian/changelog @@ -6,6 +6,7 @@ mcl (1:14-137+ds-1) UNRELEASED; urgency=medium prevent building the package twice in a row * Standards-Version: 4.1.3 * debhelper 11 + * Fix further spelling issues -- Andreas Tille <[email protected]> Mon, 22 Jan 2018 11:30:15 +0100 diff --git a/debian/patches/spelling.patch b/debian/patches/spelling.patch index 498696b..7842969 100644 --- a/debian/patches/spelling.patch +++ b/debian/patches/spelling.patch @@ -117,6 +117,15 @@ Description: Fix spelling loading networks is by using \mysib{mcxload}. The option \genopt{-write-expanded} can be useful for exploring more complicated input transformations that incorporate an expansion step, but is not really +@@ -974,7 +974,7 @@ option.} + although this almost never happens in practice, as it requires some + particular type of symmetry to be present in the input graph (not just any + symmetry will do). Mathematically speaking, this is a conjecture and not a +- theorem, but the present author wil eat his shoe if it fails to be true (for ++ theorem, but the present author will eat his shoe if it fails to be true (for + marzipan values of shoe). It is easy though to construct an input graph for + which certain mcl settings result in overlap - for example a line graph on + an odd number of nodes. The default is to excise overlapping parts and @@ -1421,7 +1421,7 @@ with value 0.8.} Euclidean data. So mcl in its canonical form is certainly not fit for boundary detection or image segmentation. I experimented with a modified @@ -410,3 +419,58 @@ Description: Fix spelling * * support growing files. and look at other items in the grep source code. */ +--- a/scripts/mlm-quilt ++++ b/scripts/mlm-quilt +@@ -12,7 +12,7 @@ + # + # !!! + # try tree search with depth 2 when testing descend. +-# !encapsulate PN_keep etc initalization and updating. ++# !encapsulate PN_keep etc initialization and updating. + # write clusters with scores, consensus. + + # [bc-9-1-02|fam41/rip26] mlmimpromptu --ignore-size=3 --fnannot=../data/paf41.ipro +--- a/src/mcl/procinit.c ++++ b/src/mcl/procinit.c +@@ -209,7 +209,7 @@ mcxOptAnchor mclProcOptions[] = + , MCX_OPT_HASARG | MCX_OPT_HIDDEN + , PROC_OPT_RPRUNE + , "<int>" +- , "use inital pruning cutoff <MAX>/<int>" ++ , "use initial pruning cutoff <MAX>/<int>" + } + , { "-skid" + , MCX_OPT_HASARG | MCX_OPT_HIDDEN +--- a/src/shmx/mcxdiameter.c ++++ b/src/shmx/mcxdiameter.c +@@ -916,7 +916,7 @@ void compute_scores_up_vc / + ) + { dim j + ; for (j=0;j<N_COLS(up);j++) +- up->cols[j].val = 1.0 /* accumulator; initalised */ ++ up->cols[j].val = 1.0 /* accumulator; initialised */ + /* question: initialise everywhere? */ + + ; for (j=0;j<n_order;j++) +--- a/doc/clmorder.azm ++++ b/doc/clmorder.azm +@@ -66,7 +66,7 @@ + {\defopt{-o}{<fname>}} + } + \car{ +- As decribed above. ++ As described above. + } + + \'end{itemize} +--- a/doc/mcxload.azm ++++ b/doc/mcxload.azm +@@ -467,7 +467,7 @@ + {\defopt{-pack-rnum}{<num>}{set row range}} + } + \car{ +- The \genopt{-packed} option allows to read machine-readable data ++ The \genopt{-packed} option allows one to read machine-readable data + directly. The data has to correspond to the data types for indexes + and values with with MCL was compiled. The use of \genopt{-pack-cnum} + and \genopt{-pack-rnum} is required to set the limits of -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/mcl.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
