Michael R. Crusoe pushed to branch master at Debian Med / trinityrnaseq
Commits: e6bd23d0 by Michael R. Crusoe at 2018-02-17T07:53:33-08:00 New upstream version 2.6.5+dfsg - - - - - 8e83b35d by Michael R. Crusoe at 2018-03-28T07:11:50-07:00 fix merge error - - - - - 6cd5e00e by Michael R. Crusoe at 2018-03-28T07:20:13-07:00 remove hpc_conf from docs list - - - - - bcfbd8c4 by Michael R. Crusoe at 2018-03-28T08:08:29-07:00 find new upstream release - - - - - a7e74199 by Michael R. Crusoe at 2018-03-28T08:15:43-07:00 New upstream version 2.6.6+dfsg - - - - - 8570d63e by Michael R. Crusoe at 2018-03-28T08:18:52-07:00 Update upstream source from tag 'upstream/2.6.6+dfsg' Update to upstream version '2.6.6+dfsg' with Debian dir 57da8dad63cc191474b1be4d8c185e2358b5ef6e - - - - - c21a312d by Michael R. Crusoe at 2018-03-28T08:20:28-07:00 2.6.6+dfsg-1 - - - - - baf7d957 by Michael R. Crusoe at 2018-03-28T10:00:19-07:00 build and ship seqtk-trinity - - - - - 30 changed files: - Analysis/DifferentialExpression/PtR - Analysis/DifferentialExpression/cut_tree_into_clusters.pl - Analysis/DifferentialExpression/define_clusters_by_cutting_tree.pl - Analysis/DifferentialExpression/diff_expr_analysis_to_heatmap_html.pl - Analysis/DifferentialExpression/matrix_to_gene_plots.pl - Analysis/DifferentialExpression/plot_expression_patterns.pl - Analysis/DifferentialExpression/remove_batch_effects_from_count_matrix.pl - Analysis/DifferentialExpression/replicates_to_sample_averages_matrix.pl - Analysis/DifferentialExpression/run_DE_analysis.pl - Analysis/DifferentialExpression/run_GOseq.pl - Analysis/DifferentialExpression/run_TMM_normalization_write_FPKM_matrix.pl - Analysis/FL_reconstruction_analysis/tier_gene_trans_alignments.tiers_to_boxplot.pl - Analysis/SuperTranscripts/AllelicVariants/run_variant_calling.py - Analysis/SuperTranscripts/DTU/dexseq_wrapper.pl - Analysis/SuperTranscripts/Trinity_gene_splice_modeler.py - Analysis/SuperTranscripts/pylib/Compact_graph_whole.py - Analysis/SuperTranscripts/pylib/Gene_splice_modeler.py - Analysis/SuperTranscripts/pylib/Node_path.py - Analysis/SuperTranscripts/pylib/Splice_model_refiner.py - Analysis/SuperTranscripts/pylib/TGraph.py - Changelog.txt - − Docker/Changelog.txt - Docker/Dockerfile - Docker/VERSION.txt - Trinity - debian/changelog - debian/control - debian/patches/adjust-trimmomatic-adapters-path - debian/patches/disable-version-check - debian/patches/fix_system_paths The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/trinityrnaseq/compare/8187ddaf3518c2c92590754c668267eea77a5d56...baf7d95721eac1adcf411a1f8fd6cf5a1c68c865 --- View it on GitLab: https://salsa.debian.org/med-team/trinityrnaseq/compare/8187ddaf3518c2c92590754c668267eea77a5d56...baf7d95721eac1adcf411a1f8fd6cf5a1c68c865 You're receiving this email because of your account on salsa.debian.org.
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