Andreas Tille pushed to branch master at Debian Med / racon
Commits: 48742472 by Andreas Tille at 2018-06-08T13:31:22+02:00 Initial packaging - - - - - 8 changed files: - + debian/changelog - + debian/compat - + debian/control - + debian/copyright - + debian/rules - + debian/source/format - + debian/upstream/metadata - + debian/watch Changes: ===================================== debian/changelog ===================================== --- /dev/null +++ b/debian/changelog @@ -0,0 +1,5 @@ +racon (1.3.1-1) UNRELEASED; urgency=medium + + * Initial release (Closes: #890187) + + -- Andreas Tille <ti...@debian.org> Fri, 08 Jun 2018 13:20:51 +0200 ===================================== debian/compat ===================================== --- /dev/null +++ b/debian/compat @@ -0,0 +1 @@ +11 ===================================== debian/control ===================================== --- /dev/null +++ b/debian/control @@ -0,0 +1,24 @@ +Source: racon +Section: science +Priority: optional +Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> +Uploaders: Cédric Lood <cedric.l...@kuleuven.be>, + Andreas Tille <ti...@debian.org> +Build-Depends: debhelper (>= 11~) +Standards-Version: 4.1.4 +Vcs-Browser: https://salsa.debian.org/med-team/racon +Vcs-Git: https://salsa.debian.org/med-team/racon.git +Homepage: https://github.com/isovic/racon + +Package: racon +Architecture: any +Depends: ${shlibs:Depends}, ${misc:Depends} +Description: consensus module for raw de novo DNA assembly of long uncorrected reads + Racon is intended as a standalone consensus module to correct raw + contigs generated by rapid assembly methods which do not include a + consensus step, such as Miniasm. + . + The goal of Racon is to generate genomic consensus which is of similar + or better quality compared to the output generated by assembly methods + which employ both error correction and consensus steps, while + providing a speedup of several times compared to those m ===================================== debian/copyright ===================================== --- /dev/null +++ b/debian/copyright @@ -0,0 +1,13 @@ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Upstream-Name: racon +Upstream-Contact: Ivan Sovic <ivan.so...@irb.hr> + Mile Sikic <mile.si...@fer.hr> +Source: https://github.com/isovic/racon/releases + +Files: * +Copyright: 2016-2018 Ivan Sovic <ivan.so...@irb.hr>, Mile Sikic +License: MIT + +Files: debian/* +Copyright: 2018 Andreas Tille <ti...@debian.org> +License: MIT ===================================== debian/rules ===================================== --- /dev/null +++ b/debian/rules @@ -0,0 +1,22 @@ +#!/usr/bin/make -f + +# DH_VERBOSE := 1 +export LC_ALL=C.UTF-8 + +include /usr/share/dpkg/default.mk +# this provides: +# DEB_SOURCE: the source package name +# DEB_VERSION: the full version of the package (epoch + upstream vers. + revision) +# DEB_VERSION_EPOCH_UPSTREAM: the package's version without the Debian revision +# DEB_VERSION_UPSTREAM_REVISION: the package's version without the Debian epoch +# DEB_VERSION_UPSTREAM: the package's upstream version +# DEB_DISTRIBUTION: the distribution(s) listed in the current entry of debian/changelog + +# for hardening you might like to uncomment this: +# export DEB_BUILD_MAINT_OPTIONS=hardening=+all + +%: + dh $@ + +#get-orig-source: +# . debian/get-orig-source ===================================== debian/source/format ===================================== --- /dev/null +++ b/debian/source/format @@ -0,0 +1 @@ +3.0 (quilt) ===================================== debian/upstream/metadata ===================================== --- /dev/null +++ b/debian/upstream/metadata @@ -0,0 +1,12 @@ +Reference: + Author: Robert Vaser and Ivan Sovic and Niranjan Nagarajan and Mile Sikic + Title: Fast and accurate de novo genome assembly from long uncorrected reads + Journal: Genome Research + Year: 2017 + Volume: 27 + Number: 5 + Pages: 737-746 + DOI: 10.1101/068122 + PMID: 28100585 + URL: https://genome.cshlp.org/content/early/2017/01/18/gr.214270.116 + eprint: https://genome.cshlp.org/content/early/2017/01/18/gr.214270.116.full.pdf+html ===================================== debian/watch ===================================== --- /dev/null +++ b/debian/watch @@ -0,0 +1,3 @@ +version=4 + +https://github.com/isovic/racon/releases .*/archive/@ANY_VERSION@@ARCHIVE_EXT@ View it on GitLab: https://salsa.debian.org/med-team/racon/commit/48742472ed79fce3a6a416b60c1bd3916023d12c -- View it on GitLab: https://salsa.debian.org/med-team/racon/commit/48742472ed79fce3a6a416b60c1bd3916023d12c You're receiving this email because of your account on salsa.debian.org.
_______________________________________________ debian-med-commit mailing list debian-med-com...@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
