Andreas Tille pushed to branch master at Debian Med / kma
Commits: ece208df by Andreas Tille at 2018-06-12T16:21:42+02:00 Initial packaging - - - - - 8 changed files: - + debian/changelog - + debian/compat - + debian/control - + debian/copyright - + debian/rules - + debian/source/format - + debian/upstream/metadata - + debian/watch Changes: ===================================== debian/changelog ===================================== --- /dev/null +++ b/debian/changelog @@ -0,0 +1,5 @@ +kma (0.14.4+git20180611.7e14ef6-1) UNRELEASED; urgency=medium + + * Initial release (Closes: #<bug>) + + -- Andreas Tille <[email protected]> Thu, 07 Jun 2018 21:55:00 +0200 ===================================== debian/compat ===================================== --- /dev/null +++ b/debian/compat @@ -0,0 +1 @@ +11 ===================================== debian/control ===================================== --- /dev/null +++ b/debian/control @@ -0,0 +1,24 @@ +Source: kma +Maintainer: Debian Med Packaging Team <[email protected]> +Uploaders: Andreas Tille <[email protected]> +Section: science +Priority: optional +Build-Depends: debhelper (>= 11~) +Standards-Version: 4.1.4 +Vcs-Browser: https://salsa.debian.org/med-team/kma +Vcs-Git: https://salsa.debian.org/med-team/kam.git +Homepage: https://bitbucket.org/genomicepidemiology/kma + +Package: kme +Architecture: any +Depends: ${shlibs:Depends}, + ${misc:Depends} +Description: mapping genomic sequences to raw reads directly against redundant databases + KMA is mapping a method designed to map raw reads directly against + redundant databases, in an ultra-fast manner using seed and extend. KMA + is particulary good at aligning high quality reads against highly + redundant databases, where unique matches often does not exist. It works + for long low quality reads as well, such as those from Nanopore. Non- + unique matches are resolved using the "ConClave" sorting scheme, and a + consensus sequence are outputtet in addition to other common attributes, + based on our users demands. ===================================== debian/copyright ===================================== --- /dev/null +++ b/debian/copyright @@ -0,0 +1,25 @@ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Upstream-Name: kma +Upstream-Contact: [email protected] +Source: https://bitbucket.org/genomicepidemiology/kma.git + +Files: * +Copyright: 2015-2017, Philip Clausen, Technical University of Denmark +License: Apache-2.0 + +Files: debian/* +Copyright: 2018 Andreas Tille <[email protected]> +License: Apache-2.0 + +License: Apache-2.0 + Licensed under the Apache License, Version 2.0 (the "License"); + you may not use this file except in compliance with the License. + . + Unless required by applicable law or agreed to in writing, software + distributed under the License is distributed on an "AS IS" BASIS, + WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + See the License for the specific language governing permissions and + limitations under the License. + . + On Debian systems you can find the full text of the Apache-2.0 + license at /usr/share/common-licenses/Apache-2.0. ===================================== debian/rules ===================================== --- /dev/null +++ b/debian/rules @@ -0,0 +1,8 @@ +#!/usr/bin/make -f + +# DH_VERBOSE := 1 + +export DEB_BUILD_MAINT_OPTIONS=hardening=+all + +%: + dh $@ ===================================== debian/source/format ===================================== --- /dev/null +++ b/debian/source/format @@ -0,0 +1 @@ +3.0 (quilt) ===================================== debian/upstream/metadata ===================================== --- /dev/null +++ b/debian/upstream/metadata @@ -0,0 +1,12 @@ +Reference: + Author: + Title: + Journal: + Year: + Volume: + Number: + Pages: + DOI: + PMID: + URL: + eprint: ===================================== debian/watch ===================================== --- /dev/null +++ b/debian/watch @@ -0,0 +1,4 @@ +version=4 + +opts="mode=git,pretty=0.14.4+git%cd.%h" \ + https://bitbucket.org/genomicepidemiology/kma.git HEAD View it on GitLab: https://salsa.debian.org/med-team/kma/commit/ece208df846de25f7c73580bd08f33f22f22d6e8 -- View it on GitLab: https://salsa.debian.org/med-team/kma/commit/ece208df846de25f7c73580bd08f33f22f22d6e8 You're receiving this email because of your account on salsa.debian.org.
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