Andreas Tille pushed to branch master at Debian Med / ipig
Commits: 593c0f67 by Andreas Tille at 2018-07-04T09:00:33+02:00 debhelper 11 - - - - - ba801af1 by Andreas Tille at 2018-07-04T09:17:06+02:00 Point Vcs fields to salsa.debian.org - - - - - fa352f33 by Andreas Tille at 2018-07-04T09:17:06+02:00 Standards-Version: 4.1.4 - - - - - fc62b914 by Andreas Tille at 2018-07-04T09:59:02+02:00 Java Policy conform versioning of JAR - - - - - f1250536 by Andreas Tille at 2018-07-04T10:23:20+02:00 Try hard to make JAR name conform to Java policy ... but failed. - - - - - 980a6ca8 by Andreas Tille at 2018-07-04T10:27:27+02:00 Upload to unstable - - - - - 4 changed files: - debian/changelog - debian/compat - debian/control - debian/rules Changes: ===================================== debian/changelog ===================================== --- a/debian/changelog +++ b/debian/changelog @@ -1,8 +1,15 @@ -ipig (0.0.r5-3) UNRELEASED; urgency=medium +ipig (0.0.r5-3) unstable; urgency=medium + [ Steffen Moeller ] * debian/upstream/metadata: Added refs to registries - -- Steffen Moeller <[email protected]> Thu, 03 Aug 2017 13:37:12 +0200 + [ Andreas Tille ] + * debhelper 11 + * Point Vcs fields to salsa.debian.org + * Standards-Version: 4.1.4 + * Java Policy conform versioning of JAR + + -- Andreas Tille <[email protected]> Wed, 04 Jul 2018 10:24:12 +0200 ipig (0.0.r5-2) unstable; urgency=medium ===================================== debian/compat ===================================== --- a/debian/compat +++ b/debian/compat @@ -1 +1 @@ -9 +11 ===================================== debian/control ===================================== --- a/debian/control +++ b/debian/control @@ -1,26 +1,26 @@ Source: ipig -Section: science -Priority: optional Maintainer: Debian Med Packaging Team <[email protected]> Uploaders: Andreas Tille <[email protected]> -Build-Depends: debhelper (>= 9), - javahelper (>=0.25), +Section: science +Priority: optional +Build-Depends: debhelper (>= 11~), + javahelper, default-jdk, ant, libcommons-compress-java, libcommons-net-java, libjdom1-java, libxerces2-java -Standards-Version: 3.9.5 -Vcs-Browser: http://anonscm.debian.org/gitweb/?p=debian-med/ipig.git -Vcs-Git: git://anonscm.debian.org/debian-med/ipig.git +Standards-Version: 4.1.4 +Vcs-Browser: https://salsa.debian.org/med-team/ipig +Vcs-Git: https://salsa.debian.org/med-team/ipig.git Homepage: http://sourceforge.net/projects/ipig/ Package: ipig Architecture: any Depends: ${misc:Depends}, - ${java:Depends}, -Description: integrating PSMs into genome browser visualisations + ${java:Depends} +Description: integrating PSMs into genome browser visualisations iPiG targets the integration of peptide spectrum matches (PSMs) from mass spectrometry (MS) peptide identifications into genomic visualisations provided by genome browser such as the UCSC genome ===================================== debian/rules ===================================== --- a/debian/rules +++ b/debian/rules @@ -2,7 +2,8 @@ # DH_VERBOSE := 1 -SRC_VERSION =$(shell dpkg-parsechangelog | sed -ne 's/^Version: \(\([0-9]\+\):\)\?\(.*\)-.*/\3/p') +include /usr/share/dpkg/default.mk +#jarversion=$(shell echo $(DEB_VERSION_UPSTREAM) | sed 's/r//') export JAVA_HOME=/usr/lib/jvm/default-java @@ -22,6 +23,11 @@ override_dh_install: override_dh_auto_build: cp debian/build.xml build.xml - sed -i "s/DEBVERSION/"$(SRC_VERSION)"/g" build.xml +# sed -i "s/DEBVERSION/$(jarversion)/g" build.xml + sed -i "s/DEBVERSION/$(DEB_VERSION_UPSTREAM)/g" build.xml dh_auto_build - + +#override_jh_installlibs: +# jh_installlibs +# mv debian/$(DEB_SOURCE)/usr/share/java/iPiG-$(DEB_VERSION_UPSTREAM).jar debian/$(DEB_SOURCE)/usr/share/java/iPiG-$(jarversion).jar +# ln -sf iPiG-$(jarversion).jar debian/$(DEB_SOURCE)/usr/share/java/iPiG.jar View it on GitLab: https://salsa.debian.org/med-team/ipig/compare/9db4e8f97301fac867fb93442f8fb51118d3130a...980a6ca8a0cbcc5d0e133c6c4e530febc3e4a5e2 -- View it on GitLab: https://salsa.debian.org/med-team/ipig/compare/9db4e8f97301fac867fb93442f8fb51118d3130a...980a6ca8a0cbcc5d0e133c6c4e530febc3e4a5e2 You're receiving this email because of your account on salsa.debian.org.
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