Andreas Tille pushed to branch master at Debian Med / infernal
Commits: 3fce8ef5 by Andreas Tille at 2018-07-16T11:59:33+02:00 Thanks again to Yavor Doganov <[email protected]> for another very helpful hint - - - - - 1 changed file: - debian/patches/autoreconf.patch Changes: ===================================== debian/patches/autoreconf.patch ===================================== --- a/debian/patches/autoreconf.patch +++ b/debian/patches/autoreconf.patch @@ -139,3 +139,33 @@ Description: Fix configure.ac to enable autoreconf fi # 5. Checks for libraries +@@ -731,6 +731,29 @@ AC_CONFIG_FILES([easel/testsuite/Makefil + AC_CONFIG_FILES([easel/Makefile]) + AC_CONFIG_FILES([easel/documentation/Makefile]) + ++ ++AH_TOP([ ++/* RAMLIMIT (in MB) defines how much memory we're ++ * allowed to expend on alignment algorithms without ++ * switching to more efficient memory forms - e.g. ++ * in smallcyk.c ++ */ ++#ifndef RAMLIMIT ++#define RAMLIMIT 0 ++#endif ++ ++/* SRE_CONLEVEL will prob move to squid somewhere. ++ * Set to 1 to activate contract checking, during debugging. ++ */ ++#define SRE_CONLEVEL 1 ++#if (SRE_CONLEVEL >= 1) ++#include <assert.h> ++#endif ++ ++#define CMSEQDBENV "BLASTDB" ++#define CMDBENV "RFAMDB" ++]) ++ + ################################################################ + # 13. AC_OUTPUT + ################################################################ View it on GitLab: https://salsa.debian.org/med-team/infernal/commit/3fce8ef53b60465a9b9b2ee6e1266d2ba1fe548d -- View it on GitLab: https://salsa.debian.org/med-team/infernal/commit/3fce8ef53b60465a9b9b2ee6e1266d2ba1fe548d You're receiving this email because of your account on salsa.debian.org.
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