Andreas Tille pushed to branch master at Debian Med / picard-tools
Commits: 3c94ec94 by Andreas Tille at 2018-09-17T13:12:27Z New upstream version 2.18.14+dfsg - - - - - fa2a66b4 by Andreas Tille at 2018-09-17T13:13:19Z Update upstream source from tag 'upstream/2.18.14+dfsg' Update to upstream version '2.18.14+dfsg' with Debian dir 13345f76ed698a995f622cc051baa2d5bf5f2976 - - - - - 9fe71973 by Andreas Tille at 2018-09-17T13:13:19Z New upstream version - - - - - 88dc0c15 by Andreas Tille at 2018-09-17T13:14:55Z Standards-Version: 4.2.1 - - - - - 95c45cfb by Andreas Tille at 2018-09-17T13:50:55Z Adapt patches - - - - - 4da85197 by Andreas Tille at 2018-09-17T13:52:40Z Fix link - - - - - 9325575e by Andreas Tille at 2018-09-17T13:57:37Z Further adaption of patches - - - - - 30 changed files: - − .classpath - − .project - Dockerfile - build.gradle - + build_push_docker.sh - debian/changelog - debian/control - debian/libpicard-java-doc.links - debian/patches/10-build.xml.patch - debian/patches/20-shadowjar.patch - debian/patches/40-tests-fix-testng.patch - debian/patches/fix_javadoc_ascii.patch - − debian/patches/fix_test_freezing - debian/patches/series - − project/plugins.sbt - src/main/java/picard/analysis/AbstractWgsMetricsCollector.java - src/main/java/picard/analysis/AlignmentSummaryMetrics.java - src/main/java/picard/analysis/CollectMultipleMetrics.java - src/main/java/picard/analysis/CollectWgsMetrics.java - src/main/java/picard/analysis/CollectWgsMetricsWithNonZeroCoverage.java - src/main/java/picard/analysis/MergeableMetricBase.java - src/main/java/picard/analysis/TheoreticalSensitivity.java - + src/main/java/picard/analysis/TheoreticalSensitivityMetrics.java - src/main/java/picard/analysis/directed/CollectTargetedMetrics.java - src/main/java/picard/analysis/directed/TargetMetricsCollector.java - src/main/java/picard/analysis/replicates/CollectIndependentReplicateMetrics.java - src/main/java/picard/cmdline/CommandLineProgram.java - src/main/java/picard/cmdline/CommandLineSyntaxTranslater.java - src/main/java/picard/cmdline/PicardCommandLine.java - src/main/java/picard/illumina/ClusterDataToSamConverter.java The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/picard-tools/compare/790482cfbfaa93b00e36e91913412e5c47e7a8f1...9325575e20b129e379076ddced7a1583e26ab751 -- View it on GitLab: https://salsa.debian.org/med-team/picard-tools/compare/790482cfbfaa93b00e36e91913412e5c47e7a8f1...9325575e20b129e379076ddced7a1583e26ab751 You're receiving this email because of your account on salsa.debian.org.
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