Andreas Tille pushed to branch master at Debian Med / fast5
Commits: 1e0e2d34 by Andreas Tille at 2018-10-09T12:17:41Z Point Vcs fields to salsa.debian.org - - - - - 763bc6ba by Andreas Tille at 2018-10-09T12:17:41Z Standards-Version: 4.2.1 - - - - - ada6664c by Andreas Tille at 2018-10-09T12:32:14Z Do not install example binaries to enable reproducible builds - - - - - 46824048 by Andreas Tille at 2018-10-09T12:34:24Z Respect DEB_BUILD_OPTIONS in override_dh_auto_test - - - - - 35b02bcb by Andreas Tille at 2018-10-09T12:40:19Z Upload to unstable - - - - - 4 changed files: - debian/changelog - debian/control - debian/libfast5-dev.examples - debian/rules Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,15 @@ +fast5 (0.6.5-2) unstable; urgency=medium + + * Team upload. + * Point Vcs fields to salsa.debian.org + * Standards-Version: 4.2.1 + * Do not install example binaries to enable reproducible builds + (thanks for the patch to Chris Lamb <[email protected]>) + Closes: #910655 + * Respect DEB_BUILD_OPTIONS in override_dh_auto_test + + -- Andreas Tille <[email protected]> Tue, 09 Oct 2018 14:34:41 +0200 + fast5 (0.6.5-1) unstable; urgency=medium * New upstream version ===================================== debian/control ===================================== @@ -1,30 +1,28 @@ Source: fast5 -Section: science -Priority: optional Maintainer: Debian Med Packaging Team <[email protected]> Uploaders: Afif Elghraoui <[email protected]> -Build-Depends: - debhelper (>= 11), - dh-python, - libhdf5-dev, - libboost-python-dev, - python-all-dev, - python-setuptools, - python3-all-dev, - python3-setuptools, - cython, - cython3 -Standards-Version: 4.1.3 +Section: science +Priority: optional +Build-Depends: debhelper (>= 11), + dh-python, + libhdf5-dev, + libboost-python-dev, + python-all-dev, + python-setuptools, + python3-all-dev, + python3-setuptools, + cython, + cython3 +Standards-Version: 4.2.1 +Vcs-Browser: https://salsa.debian.org/med-team/fast5 +Vcs-Git: https://salsa.debian.org/med-team/fast5.git Homepage: https://github.com/mateidavid/fast5 -Vcs-Git: https://anonscm.debian.org/git/debian-med/fast5.git -Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/fast5.git Package: fast5 Architecture: all -Depends: - ${misc:Depends}, - ${python3:Depends}, - python3-fast5 (>= ${source:Version}), +Depends: ${misc:Depends}, + ${python3:Depends}, + python3-fast5 (>= ${source:Version}) Description: utilities for manipulating Oxford Nanopore Fast5 files The data produced by Oxford Nanopore Technologies (ONT) sequencers are stored in fast5 files, based on the HDF5 file format, with one @@ -32,11 +30,10 @@ Description: utilities for manipulating Oxford Nanopore Fast5 files these files, as well as to pack them for more effficient use. Package: libfast5-dev -Section: libdevel Architecture: all -Depends: - ${misc:Depends}, - libhdf5-dev | libhdf5-mpich-dev | libhdf5-openmpi-dev, +Section: libdevel +Depends: ${misc:Depends}, + libhdf5-dev | libhdf5-mpich-dev | libhdf5-openmpi-dev Description: library for reading Oxford Nanopore Fast5 files -- headers A lightweight C++11 library to read raw signal data from Oxford Nanopore's FAST5 files. @@ -44,12 +41,11 @@ Description: library for reading Oxford Nanopore Fast5 files -- headers This package provides the header files for development with fast5. Package: python-fast5 -Section: python Architecture: any -Depends: - ${shlibs:Depends}, - ${misc:Depends}, - ${python:Depends}, +Section: python +Depends: ${shlibs:Depends}, + ${misc:Depends}, + ${python:Depends} Description: library for reading Oxford Nanopore Fast5 files -- Python 2 A lightweight C++11 library to read raw signal data from Oxford Nanopore's FAST5 files. @@ -57,12 +53,11 @@ Description: library for reading Oxford Nanopore Fast5 files -- Python 2 This package provides the Python 2 library Package: python3-fast5 -Section: python Architecture: any -Depends: - ${shlibs:Depends}, - ${misc:Depends}, - ${python3:Depends}, +Section: python +Depends: ${shlibs:Depends}, + ${misc:Depends}, + ${python3:Depends} Description: library for reading Oxford Nanopore Fast5 files -- Python 3 A lightweight C++11 library to read raw signal data from Oxford Nanopore's FAST5 files. ===================================== debian/libfast5-dev.examples ===================================== @@ -1 +1,3 @@ -src/* +src/*.hpp +src/*.cpp +src/Makefile ===================================== debian/rules ===================================== @@ -19,7 +19,9 @@ export DEB_BUILD_MAINT_OPTIONS=hardening=+all --sourcedirectory=python override_dh_auto_test: +ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS))) cd src && $(MAKE) +endif override_dh_auto_clean: clean-examples dh_auto_clean View it on GitLab: https://salsa.debian.org/med-team/fast5/compare/6308fbfde60c51c3608ad262956fa55871afd48f...35b02bcb376fd7337a59f5aea0f5d3fc12ae2cee -- View it on GitLab: https://salsa.debian.org/med-team/fast5/compare/6308fbfde60c51c3608ad262956fa55871afd48f...35b02bcb376fd7337a59f5aea0f5d3fc12ae2cee You're receiving this email because of your account on salsa.debian.org.
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