Andreas Tille pushed to branch master at Debian Med / rapmap
Commits: 7243a997 by Andreas Tille at 2018-12-13T07:23:34Z Add TODO about spdlog code copy - - - - - 203ed6e5 by Andreas Tille at 2018-12-13T09:13:39Z More missing headers for salmon - - - - - 3 changed files: - + debian/TODO - debian/changelog - debian/rapmap-dev.install Changes: ===================================== debian/TODO ===================================== @@ -0,0 +1,4 @@ +Replace code copy of spdlog by Debian packaged version once either +upstream might have switched (see + https://github.com/COMBINE-lab/RapMap/issues/44 +) or we can develop a patch to adapt RapMap code to Debian spdlog. ===================================== debian/changelog ===================================== @@ -1,3 +1,9 @@ +rapmap (0.12.0+dfsg-2) UNRELEASED; urgency=medium + + * Add further header files to rapmap-dev since these are used in salmon + + -- Andreas Tille <[email protected]> Wed, 12 Dec 2018 23:15:17 +0100 + rapmap (0.12.0+dfsg-1) unstable; urgency=medium * New upstream version ===================================== debian/rapmap-dev.install ===================================== @@ -6,16 +6,23 @@ src/RapMapSAIndex.cpp usr/share/rapmap/src src/RapMapSAIndexer.cpp usr/share/rapmap/src src/RapMapUtils.cpp usr/share/rapmap/src +include/bit_*.h usr/include/rapmap include/kseq.h usr/include/rapmap include/macros.h usr/include/rapmap include/rank9b.h usr/include/rapmap -include/chobo/small_vector.hpp usr/include/chobo +include/chobo/small_vector.hpp usr/include/rapmap/chobo include/sparsepp/spp.h usr/include/rapmap/sparsepp include/sparsepp/spp_config.h usr/include/rapmap/sparsepp include/sparsepp/spp_stdint.h usr/include/rapmap/sparsepp include/sparsepp/spp_traits.h usr/include/rapmap/sparsepp include/sparsepp/spp_utils.h usr/include/rapmap/sparsepp +include/Boo*.hpp usr/include/rapmap +include/FrugalBooMap.hpp usr/include/rapmap +include/IndexHeader.hpp usr/include/rapmap include/Kmer.hpp usr/include/rapmap +include/RapMapConfig.hpp usr/include/rapmap include/RapMapFileSystem.hpp usr/include/rapmap +include/RapMapSAIndex.hpp usr/include/rapmap include/RapMapUtils.hpp usr/include/rapmap include/SparseHashSerializer.hpp usr/include/rapmap +include/SpinLock.hpp usr/include/rapmap View it on GitLab: https://salsa.debian.org/med-team/rapmap/compare/f50b9d72962e0ccad8e35d0942890cfd1ad65015...203ed6e583851f1eda3ad537d70dba73e4a81bde -- View it on GitLab: https://salsa.debian.org/med-team/rapmap/compare/f50b9d72962e0ccad8e35d0942890cfd1ad65015...203ed6e583851f1eda3ad537d70dba73e4a81bde You're receiving this email because of your account on salsa.debian.org.
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