Andreas Tille pushed to branch master at Debian Med / libbpp-seq-omics
Commits: 4d38996d by Andreas Tille at 2019-01-06T15:45:41Z Easier way to provide symbols for amd64 only - - - - - 22053bd7 by Andreas Tille at 2019-01-06T15:48:19Z Adapt symbols - - - - - 11a90e2e by Andreas Tille at 2019-01-06T16:09:42Z Standards-Version: 4.3.0 - - - - - eb27cf40 by Andreas Tille at 2019-01-06T16:09:43Z Remove trailing whitespace in debian/copyright - - - - - 5ccbf2a4 by Andreas Tille at 2019-01-06T16:29:57Z Spelling - - - - - c92393ae by Andreas Tille at 2019-01-06T16:34:09Z Upload to unstable - - - - - 5 changed files: - debian/changelog - debian/control - debian/copyright - debian/libbpp-seq-omics3.symbols → debian/libbpp-seq-omics3.symbols.amd64 - debian/rules Changes: ===================================== debian/changelog ===================================== @@ -1,9 +1,17 @@ -libbpp-seq-omics (2.4.1-2) UNRELEASED; urgency=medium +libbpp-seq-omics (2.4.1-2) unstable; urgency=medium + [ Jelmer Vernooij ] * Use secure copyright file specification URI. * Trim trailing whitespace. - -- Jelmer Vernooij <[email protected]> Wed, 24 Oct 2018 22:54:36 +0000 + [ Andreas Tille ] + * Easier way to provide symbols for amd64 only + * Adapt symbols + Closes: #917591 + * Standards-Version: 4.3.0 + * Remove trailing whitespace in debian/copyright + + -- Andreas Tille <[email protected]> Sun, 06 Jan 2019 17:30:24 +0100 libbpp-seq-omics (2.4.1-1) unstable; urgency=medium ===================================== debian/control ===================================== @@ -8,7 +8,7 @@ Build-Depends: debhelper (>= 11~), cmake, d-shlibs (>= 0.82), libbpp-seq-dev (>= 2.4.1) -Standards-Version: 4.2.0 +Standards-Version: 4.3.0 Vcs-Browser: https://salsa.debian.org/med-team/libbpp-seq-omics Vcs-Git: https://salsa.debian.org/med-team/libbpp-seq-omics.git Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page ===================================== debian/copyright ===================================== @@ -19,7 +19,7 @@ License: GPL-2+ it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. - . + . This package is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the @@ -159,7 +159,7 @@ License: CeCILL . The purpose of the Agreement is the grant by the Licensor to the Licensee of a non-exclusive, transferable and worldwide license for the - Software as set forth in Article 5 hereinafter for the whole term of the + Software as set forth in Article 5 hereinafter for the whole term of the protection granted by the rights over said Software. . . @@ -179,7 +179,7 @@ License: CeCILL characteristics of the Software, to the limited warranty, and to the fact that its use is restricted to experienced users has been provided to the Licensee prior to its acceptance as set forth in Article 3.1 - hereinabove, and the Licensee hereby acknowledges that it has read and + hereinabove, and the Licensee hereby acknowledges that it has read and understood it. . . @@ -373,7 +373,7 @@ License: CeCILL terms and conditions of such technical assistance, and/or such maintenance, shall be set forth in a separate instrument. Only the Licensor offering said maintenance and/or technical assistance services - shall incur liability therefor. + shall incur liability therefore. . 7.2 Similarly, any Licensor is entitled to offer to its licensees, under its sole responsibility, a warranty, that shall only be binding upon @@ -427,7 +427,7 @@ License: CeCILL 9.3 The Licensee acknowledges that the Software is supplied "as is" by the Licensor without any other express or tacit warranty, other than that provided for in Article 9.2 and, in particular, without any warranty - as to its commercial value, its secured, safe, innovative or relevant + as to its commercial value, its secured, safe, innovative or relevant nature. . Specifically, the Licensor does not warrant that the Software is free ===================================== debian/libbpp-seq-omics3.symbols → debian/libbpp-seq-omics3.symbols.amd64 ===================================== @@ -39,7 +39,6 @@ libbpp-seq-omics.so.3 libbpp-seq-omics3 #MINVER# _ZN3bpp12EdSymbolList7shuffleEv@Base 2.4.1 _ZN3bpp12EdSymbolListixEm@Base 2.4.1 _ZN3bpp12SequenceMaskC1ERKSt6vectorIbSaIbEEb@Base 2.4.1 - _ZN3bpp12SequenceMaskD0Ev@Base 2.4.1 _ZN3bpp13AlphabetStateD0Ev@Base 2.4.1 _ZN3bpp13AlphabetStateD1Ev@Base 2.4.1 _ZN3bpp13BasicSequenceD0Ev@Base 2.4.1 @@ -346,10 +345,6 @@ libbpp-seq-omics.so.3 libbpp-seq-omics3 #MINVER# _ZNK3bpp12EdSymbolList4sizeEv@Base 2.4.1 _ZNK3bpp12EdSymbolList5cloneEv@Base 2.4.1 _ZNK3bpp12EdSymbolListixEm@Base 2.4.1 - _ZNK3bpp12SequenceMask11isRemovableEv@Base 2.4.1 - _ZNK3bpp12SequenceMask11isValidWithERKNS_22SequenceWithAnnotationEb@Base 2.4.1 - _ZNK3bpp12SequenceMask7getTypeB5cxx11Ev@Base 2.4.1 - _ZNK3bpp12SequenceMask8isSharedEv@Base 2.4.1 _ZNK3bpp13AlphabetState5cloneEv@Base 2.4.1 _ZNK3bpp13CodonAlphabet23getUnknownCharacterCodeEv@Base 2.4.1 _ZNK3bpp14LetterAlphabet16isCharInAlphabetERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 2.4.1 @@ -991,9 +986,7 @@ libbpp-seq-omics.so.3 libbpp-seq-omics3 #MINVER# _ZThn8_N3bpp22SequenceWithAnnotation10setContentERKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EE@Base 2.4.1 _ZThn8_N3bpp22SequenceWithAnnotation10setContentERKSt6vectorIiSaIiEE@Base 2.4.1 _ZTv0_n112_NK3bpp23VectorSequenceContainer20getNumberOfSequencesEv@Base 2.4.1 - _ZTv0_n144_NK3bpp12SequenceMask7getTypeB5cxx11Ev@Base 2.4.1 _ZTv0_n144_NK3bpp15SequenceQuality7getTypeB5cxx11Ev@Base 2.4.1 - _ZTv0_n152_NK3bpp12SequenceMask11isValidWithERKNS_22SequenceWithAnnotationEb@Base 2.4.1 _ZTv0_n152_NK3bpp15SequenceQuality11isValidWithERKNS_22SequenceWithAnnotationEb@Base 2.4.1 _ZTv0_n168_NK3bpp12EdSymbolListixEm@Base 2.4.1 _ZTv0_n168_NK3bpp15BasicSymbolListixEm@Base 2.4.1 @@ -1003,7 +996,6 @@ libbpp-seq-omics.so.3 libbpp-seq-omics3 #MINVER# _ZTv0_n24_N3bpp10BppIntegerD1Ev@Base 2.4.1 _ZTv0_n24_N3bpp11MafSequenceD0Ev@Base 2.4.1 _ZTv0_n24_N3bpp11MafSequenceD1Ev@Base 2.4.1 - _ZTv0_n24_N3bpp12SequenceMaskD0Ev@Base 2.4.1 _ZTv0_n24_N3bpp13AlphabetStateD0Ev@Base 2.4.1 _ZTv0_n24_N3bpp13AlphabetStateD1Ev@Base 2.4.1 _ZTv0_n24_N3bpp13BasicSequenceD0Ev@Base 2.4.1 @@ -1142,7 +1134,6 @@ libbpp-seq-omics.so.3 libbpp-seq-omics3 #MINVER# _ZTv0_n48_N3bpp25SimpleMafStatisticsResult8setValueERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEi@Base 2.4.1 _ZTv0_n48_N3bpp36CsvStatisticsOutputIterationListener14iterationStopsEv@Base 2.4.1 _ZTv0_n48_NK3bpp12EdSymbolList11getAlphabetEv@Base 2.4.1 - _ZTv0_n48_NK3bpp12SequenceMask11isRemovableEv@Base 2.4.1 _ZTv0_n48_NK3bpp15SequenceQuality11isRemovableEv@Base 2.4.1 _ZTv0_n48_NK3bpp21AbstractMafStatistics9getResultEv@Base 2.4.1 _ZTv0_n48_NK3bpp22SequenceWithAnnotation7getNameB5cxx11Ev@Base 2.4.1 @@ -1162,7 +1153,6 @@ libbpp-seq-omics.so.3 libbpp-seq-omics3 #MINVER# _ZTv0_n56_N3bpp34SiteFrequencySpectrumMafStatistics7computeERKNS_8MafBlockE@Base 2.4.1 _ZTv0_n56_N3bpp37FourSpeciesPatternCountsMafStatistics7computeERKNS_8MafBlockE@Base 2.4.1 _ZTv0_n56_NK3bpp12EdSymbolList4sizeEv@Base 2.4.1 - _ZTv0_n56_NK3bpp12SequenceMask8isSharedEv@Base 2.4.1 _ZTv0_n56_NK3bpp15BasicSymbolList4sizeEv@Base 2.4.1 _ZTv0_n56_NK3bpp15SequenceQuality8isSharedEv@Base 2.4.1 _ZTv0_n64_N3bpp16GffFeatureReader21getFeaturesOfSequenceERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERNS_18SequenceFeatureSetE@Base 2.4.1 ===================================== debian/rules ===================================== @@ -9,23 +9,6 @@ CMAKE_EXTRA_FLAGS += -DBUILD_TESTING=OFF %: dh $@ -override_dh_makeshlibs: -ifeq ($(DEB_BUILD_ARCH),amd64) - echo "Architecture amd64 is the only one where a symbols file is provided" -else - echo "Symbols file for architecture $(DEB_BUILD_ARCH) is not provided" - mkdir -p debian/hidesymbols - mv debian/*.symbols debian/hidesymbols -endif - dh_makeshlibs -ifeq ($(DEB_BUILD_ARCH),amd64) - echo "dh_makeshlibs for architecture amd64 including symbols done" -else - # restore original debian/ dir to enable building twice in a row - mv debian/hidesymbols/*.symbols debian - rmdir debian/hidesymbols -endif - override_dh_install: dh_install d-shlibmove --commit \ View it on GitLab: https://salsa.debian.org/med-team/libbpp-seq-omics/compare/73b77ea7fc241edc0489e6d2e95fb728da806f33...c92393aee4c0a750e18b2c31b49a775d050f78bd -- View it on GitLab: https://salsa.debian.org/med-team/libbpp-seq-omics/compare/73b77ea7fc241edc0489e6d2e95fb728da806f33...c92393aee4c0a750e18b2c31b49a775d050f78bd You're receiving this email because of your account on salsa.debian.org.
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