Andreas Tille pushed to branch master at Debian Med / htsjdk
Commits: cfc2c703 by Andreas Tille at 2019-01-24T16:31:37Z New upstream version 2.18.2+dfsg - - - - - 7c0ed1d7 by Andreas Tille at 2019-01-24T16:31:54Z Update upstream source from tag 'upstream/2.18.2+dfsg' Update to upstream version '2.18.2+dfsg' with Debian dir ca808595f9f055f14050c5b580336d07292c24c3 - - - - - a45660a7 by Andreas Tille at 2019-01-24T16:31:54Z New upstream version - - - - - e04f60b1 by Andreas Tille at 2019-01-24T16:31:54Z debhelper 12 - - - - - 2a8bb89c by Andreas Tille at 2019-01-24T16:31:56Z Standards-Version: 4.3.0 - - - - - 012f16c3 by Andreas Tille at 2019-01-24T16:31:58Z Remove trailing whitespace in debian/changelog - - - - - 3b36bbcf by Andreas Tille at 2019-01-24T16:48:40Z Cleanup changelog - - - - - 30 changed files: - debian/changelog - debian/compat - debian/control - src/main/java/htsjdk/samtools/BAMFileReader.java - + src/main/java/htsjdk/samtools/BAMSBIIndexer.java - src/main/java/htsjdk/samtools/CRAMIterator.java - src/main/java/htsjdk/samtools/SAMSequenceRecord.java - src/main/java/htsjdk/samtools/SAMUtils.java - + src/main/java/htsjdk/samtools/SBIIndex.java - + src/main/java/htsjdk/samtools/SBIIndexWriter.java - src/main/java/htsjdk/samtools/SamReaderFactory.java - src/main/java/htsjdk/samtools/SamStreams.java - src/main/java/htsjdk/samtools/apps/TimeChannel.java - src/main/java/htsjdk/samtools/apps/TimeRandomAccessFile.java - src/main/java/htsjdk/samtools/cram/build/CompressionHeaderFactory.java - src/main/java/htsjdk/samtools/cram/build/ContainerFactory.java - src/main/java/htsjdk/samtools/cram/build/CramIO.java - src/main/java/htsjdk/samtools/cram/io/ExternalCompression.java → src/main/java/htsjdk/samtools/cram/compression/ExternalCompression.java - src/main/java/htsjdk/samtools/cram/encoding/ExternalCompressor.java → src/main/java/htsjdk/samtools/cram/compression/ExternalCompressor.java - src/main/java/htsjdk/samtools/cram/encoding/rans/Constants.java → src/main/java/htsjdk/samtools/cram/compression/rans/Constants.java - src/main/java/htsjdk/samtools/cram/encoding/rans/D04.java → src/main/java/htsjdk/samtools/cram/compression/rans/D04.java - src/main/java/htsjdk/samtools/cram/encoding/rans/D14.java → src/main/java/htsjdk/samtools/cram/compression/rans/D14.java - src/main/java/htsjdk/samtools/cram/encoding/rans/Decoding.java → src/main/java/htsjdk/samtools/cram/compression/rans/Decoding.java - src/main/java/htsjdk/samtools/cram/encoding/rans/E04.java → src/main/java/htsjdk/samtools/cram/compression/rans/E04.java - src/main/java/htsjdk/samtools/cram/encoding/rans/E14.java → src/main/java/htsjdk/samtools/cram/compression/rans/E14.java - src/main/java/htsjdk/samtools/cram/encoding/rans/Encoding.java → src/main/java/htsjdk/samtools/cram/compression/rans/Encoding.java - src/main/java/htsjdk/samtools/cram/encoding/rans/Frequencies.java → src/main/java/htsjdk/samtools/cram/compression/rans/Frequencies.java - src/main/java/htsjdk/samtools/cram/encoding/rans/RANS.java → src/main/java/htsjdk/samtools/cram/compression/rans/RANS.java - src/main/java/htsjdk/samtools/cram/encoding/rans/Utils.java → src/main/java/htsjdk/samtools/cram/compression/rans/Utils.java - − src/main/java/htsjdk/samtools/cram/encoding/BitCodec.java The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/htsjdk/compare/d98b433135cf59e0060288b4075bfa3ed55f9d13...3b36bbcfc8c0e131f5292530a2da483803aa9b88 -- View it on GitLab: https://salsa.debian.org/med-team/htsjdk/compare/d98b433135cf59e0060288b4075bfa3ed55f9d13...3b36bbcfc8c0e131f5292530a2da483803aa9b88 You're receiving this email because of your account on salsa.debian.org.
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