Andreas Tille pushed to branch upstream at Debian Med / manta
Commits: d55193c8 by Andreas Tille at 2019-04-24T14:56:18Z New upstream version 1.5.0+dfsg - - - - - 30 changed files: - CHANGELOG.md - README.md - docs/developerGuide/README.md - docs/methods/primary/methods.tex - docs/userGuide/README.md - src/c++/lib/alignment/AlignmentScoringUtilImpl.hh - src/c++/lib/alignment/GlobalLargeIndelAlignerImpl.hh - src/c++/lib/alignment/SingleRefAlignerShared.hh - src/c++/lib/alignment/SingleRefAlignerSharedImpl.hh - src/c++/lib/applications/EstimateSVLoci/ESLOptions.cpp - src/c++/lib/applications/GenerateSVCandidates/EdgeRetrieverJumpBin.hh - src/c++/lib/applications/GenerateSVCandidates/FatSVCandidate.cpp - src/c++/lib/applications/GenerateSVCandidates/FatSVCandidate.hh - src/c++/lib/applications/GenerateSVCandidates/GSCOptions.cpp - src/c++/lib/applications/GenerateSVCandidates/GSCOptions.hh - src/c++/lib/applications/GenerateSVCandidates/GenerateSVCandidates.cpp - src/c++/lib/applications/GenerateSVCandidates/SVCandidateAssemblyRefiner.cpp - src/c++/lib/applications/GenerateSVCandidates/SVCandidateAssemblyRefiner.hh - src/c++/lib/applications/GenerateSVCandidates/SVFinder.cpp - src/c++/lib/applications/GenerateSVCandidates/SVFinder.hh - src/c++/lib/applications/GenerateSVCandidates/SVScorePairAltProcessor.cpp - src/c++/lib/applications/GenerateSVCandidates/SVScorePairAltProcessor.hh - src/c++/lib/applications/GenerateSVCandidates/SVScorePairRefProcessor.hh - src/c++/lib/applications/GenerateSVCandidates/SVScorer.cpp - src/c++/lib/applications/GetAlignmentStats/AlignmentStatsOptions.cpp - src/c++/lib/applications/GetChromDepth/ChromDepthOptions.cpp - src/c++/lib/applications/MergeAlignmentStats/MergeAlignmentStats.hh - src/c++/lib/applications/MergeAlignmentStats/MergeAlignmentStatsOptions.cpp - src/c++/lib/applications/SummarizeAlignmentStats/SASOptions.cpp - src/c++/lib/applications/SummarizeAlignmentStats/SummarizeAlignmentStats.hh The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/manta/commit/d55193c8730efeae3224273c4378c89236541994 -- View it on GitLab: https://salsa.debian.org/med-team/manta/commit/d55193c8730efeae3224273c4378c89236541994 You're receiving this email because of your account on salsa.debian.org.
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