Andreas Tille pushed to branch upstream at Debian Med / libarb
Commits: 1557d956 by Andreas Tille at 2019-06-07T04:53:18Z New upstream version 6.0.6 - - - - - 1 changed file: - + WINDOW/aw_awar_defs.hxx Changes: ===================================== WINDOW/aw_awar_defs.hxx ===================================== @@ -0,0 +1,65 @@ +#ifndef AW_AWAR_DEFS_HXX +#define AW_AWAR_DEFS_HXX + +#define AWAR_DB "tmp/nt/arbdb/" +#define AWAR_DB_PATH AWAR_DB "file_name" +#define AWAR_DB_TYPE AWAR_DB "type" +#define AWAR_DB_FILTER AWAR_DB "filter" +#define AWAR_DB_NAME AWAR_DB_PATH "_without_path" // awar is automatically updated when AWAR_DB_PATH changes + +#define AWAR_DEFAULT_ALIGNMENT "presets/use" // has to match ../ARBDB/arbdb.h@GB_DEFAULT_ALIGNMENT + +#define AWAR_TREE "focus/tree_name" +#define AWAR_TREE_REFRESH "tmp/focus/tree_refresh" // touch this awar to refresh the tree display +#define AWAR_CONFIGURATION "focus/configuration" + +#define AWAR_SECURITY_LEVEL "tmp/etc/security_level" + +#define AWAR_GDE_EXPORT_FILTER "tmp/gde/export_filter" +#define AWAR_GDE_FILTER "tmp/gde/filter" + +#define AWAR_DB_COMMENT "description" + +#define AWAR_PT_SERVER "nt/pt_server" +#define AWAR_TARGET_STRING "nt/target_string" +#define AWAR_PRIMER_TARGET_STRING "nt/primer_target_string" +#define AWAR_GENE_CONTENT "nt/gene_content" +#define AWAR_MAX_MISMATCHES "nt/max_mismatches" +#define AWAR_ITARGET_STRING "nt/itarget_string" +#define AWAR_EXPERT "nt/expert" + +#define AWAR_SAI_COLOR_STR "tmp/sai_color_str" // to visualize SAIs in probe Match window + +// local awars for edit and edit4: + +#define AWAR_SPECIES_NAME_LOCAL "tmp/edit/species_name" // string: name of selected species +#define AWAR_CURSOR_POSITION_LOCAL "tmp/edit/cursor_position" // int: position in sequence [0..N-1] +#define AWAR_EDITOR_ALIGNMENT "tmp/edit/alignment" // string: alignment used by editor + +// global awars + +#define AWAR_CURSOR_POSITION "tmp/focus/cursor_position" // int: position in sequence range=[1;len] +#define AWAR_SET_CURSOR_POSITION "tmp/focus/set_cursor_position" // int: set position in sequence (remote control for ARB_EDIT4) range=[0;len-1] + +#define AWAR_SPECIES_NAME "tmp/focus/species_name" // string: name of selected species +#define AWAR_INFO_BUTTON_TEXT "tmp/focus/info_button_text" // string: to display selected species +#define AWAR_ORGANISM_NAME "tmp/focus/organism_name" // string: name of selected organism (differs from AWAR_SPECIES_NAME only for pseudo-gene-species) +/* - normally AWAR_ORGANISM_NAME contains the same value as AWAR_SPECIES_NAME + - if AWAR_SPECIES_NAME contains the name of a pseudo gene-species then AWAR_ORGANISM_NAME + contains the name of the species the pseudo gene-species originated from */ +// #define AWAR_EXPERIMENT_NAME "tmp/focus/experiment_name" // string : name of selected experiment +#define AWAR_SAI_NAME "tmp/focus/sai_name" // string : name of selected SAI (e.g. in EDIT4 and 'Manage SAI') +#define AWAR_SAI_GLOBAL "tmp/focus/sai_global" // string : name of selected SAI in EDIT4/Visualize SAI Tool - used in RNA3D Tool + +#define AWAR_HELIX_NAME "tmp/focus/helix_name" // string: name of selected helix, for helix numbers append _NR, get default by GBT_get_default_helix + +#define AWAR_ERROR_MESSAGES "tmp/message/displayed" // error-messages: display awar + +#define AWAR_FOOTER "tmp/LeftFooter" // mode line (showing help for selected mode) +#define AWAR_FOOTER_MAX_LEN 100 // max allowed textlen for mode line + +#define AWAR_AWM_MASK "tmp/awm_mask" + +#else +#error aw_awar_defs.hxx included twice +#endif View it on GitLab: https://salsa.debian.org/med-team/libarb/commit/1557d956cfd2fe72f78c443e3a65637a4df3f1fa -- View it on GitLab: https://salsa.debian.org/med-team/libarb/commit/1557d956cfd2fe72f78c443e3a65637a4df3f1fa You're receiving this email because of your account on salsa.debian.org.
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