Andreas Tille pushed to branch debian/stretch-backports at Debian Med / spades
Commits: 67452d60 by Andreas Tille at 2018-10-16T18:45:31Z New upstream version 3.13.0+dfsg - - - - - 827aee0c by Andreas Tille at 2018-10-16T18:45:36Z Update upstream source from tag 'upstream/3.13.0+dfsg' Update to upstream version '3.13.0+dfsg' with Debian dir 0768d131941f4e8144c7690f47cd52076e696ede - - - - - c2d2816c by Andreas Tille at 2018-10-16T18:45:36Z New upstream version - - - - - 29f8a294 by Andreas Tille at 2018-10-16T18:59:27Z Adapt patches - - - - - f15cc256 by Andreas Tille at 2018-10-16T19:45:06Z Upstream has removed dipspades - - - - - 52e4cb3d by Andreas Tille at 2018-10-16T20:05:06Z Remove some more dipspades references - - - - - 80a7ae0f by Andreas Tille at 2018-10-16T20:07:33Z Really remove all dipspades references - - - - - be18902a by Andreas Tille at 2018-10-16T20:23:08Z Upload to unstable - - - - - 0f9831fe by Michael R. Crusoe at 2019-01-17T11:20:08Z restore bundled jemalloc - - - - - e1e4b751 by Michael R. Crusoe at 2019-01-17T11:21:14Z New upstream version 3.13.0+dfsg2 - - - - - 7040094c by Michael R. Crusoe at 2019-01-17T11:21:22Z Update upstream source from tag 'upstream/3.13.0+dfsg2' Update to upstream version '3.13.0+dfsg2' with Debian dir a6b95c5dd1db70925d6ad61004cd3a3d9d6c1620 - - - - - 5e5971a3 by Michael R. Crusoe at 2019-01-17T11:28:51Z restore bundled jemalloc part 2 - - - - - 69116e78 by Michael R. Crusoe at 2019-01-17T15:43:33Z Pull releases from GitHib. - - - - - 0ad9955c by Michael R. Crusoe at 2019-01-17T15:43:34Z Standards-Version: 4.3.0 (no changes needed) - - - - - 5e3dfc55 by Michael R. Crusoe at 2019-01-17T15:46:45Z Install README.md to /usr/share/doc/spades/ - - - - - 4ba8e0c5 by Michael R. Crusoe at 2019-01-17T15:54:56Z upload to unstable - - - - - e709085c by Michael R. Crusoe at 2019-01-17T18:13:22Z Also remove jemalloc from (build-)depends. - - - - - 2e3b2cfb by Andreas Tille at 2019-10-08T15:39:30Z Fix watch file - - - - - 365d0ad3 by Andreas Tille at 2019-10-08T15:41:16Z Moved packaging to Python3 - - - - - 5937a0b3 by Andreas Tille at 2019-10-08T16:17:07Z New upstream version - - - - - 05939cac by Andreas Tille at 2019-10-08T16:17:09Z New upstream version 3.13.1 - - - - - d3f6d486 by Andreas Tille at 2019-10-08T16:17:30Z Update upstream source from tag 'upstream/3.13.1' Update to upstream version '3.13.1' with Debian dir 6e303cab55c3681c9ae6371ba96d9f210790afde - - - - - b1626032 by Andreas Tille at 2019-10-08T16:17:31Z debhelper-compat 12 - - - - - 5da42bf6 by Andreas Tille at 2019-10-08T17:41:13Z Standards-Version: 4.4.1 - - - - - 89bd17cf by Andreas Tille at 2019-10-08T17:54:04Z All original code was moved to subdir assembler - reflect this move in quilt patches - - - - - e4717a4a by Andreas Tille at 2019-10-08T18:27:23Z Respect move to dir assembler - - - - - 95087a4a by Andreas Tille at 2019-11-12T15:27:17Z Move source package lintian overrides to debian/source. Fixes lintian: package-uses-deprecated-source-override-location See https://lintian.debian.org/tags/package-uses-deprecated-source-override-location.html for more details. - - - - - 4740e25f by Andreas Tille at 2019-11-12T15:27:23Z Set upstream metadata fields: Repository. - - - - - 533d1e6e by Andreas Tille at 2019-11-12T16:11:40Z Make sure Python3 interpreter is used in scripts - - - - - 2a1a3c6d by Andreas Tille at 2019-11-12T17:57:21Z Specify yaml loader - - - - - 54bc9d00 by Andreas Tille at 2019-11-12T18:12:30Z Hopefully fix File "/build/spades-3.13.1/install_spades/../../share/spades/spades_pipeline/spades_logic. for src, target in replacements.iteritems(): AttributeError: 'dict' object has no attribute 'iteritems' - - - - - 9207cab9 by Andreas Tille at 2019-11-12T18:13:25Z Build-Depends: s/python-all-dev/python3-dev/ - - - - - 3b3309c0 by Andreas Tille at 2019-11-13T13:24:53Z Fix pyyaml patch - - - - - 639914be by Andreas Tille at 2019-11-13T13:25:13Z Fix Python3 patch - - - - - 68470522 by Andreas Tille at 2019-11-13T14:32:17Z More yaml.load issues fixed - - - - - 0c6e72d1 by Andreas Tille at 2019-11-13T15:29:31Z Fix location of docs - - - - - 6cd83d99 by Andreas Tille at 2019-11-17T18:35:46Z Fix changelog creation - - - - - 14ca7cff by Andreas Tille at 2019-11-17T18:40:44Z New upstream version 3.13.1+dfsg - - - - - 3e3bdaeb by Andreas Tille at 2019-11-17T22:30:40Z Drop ioncommunity and webvis dir from source which has compressed JS but its not used in the binary package - - - - - f1ec307f by Andreas Tille at 2019-11-17T22:31:25Z New upstream version 3.13.1+dfsg - - - - - 4e682ce0 by Andreas Tille at 2019-11-18T10:18:53Z Adapt to new file locations - - - - - 89b1e879 by Andreas Tille at 2019-11-18T10:19:29Z New upstream version 3.13.1+dfsg - - - - - 84e500a0 by Andreas Tille at 2019-11-18T10:19:38Z Update upstream source from tag 'upstream/3.13.1+dfsg' Update to upstream version '3.13.1+dfsg' with Debian dir 4c0a5468bd150dffa327b94735c6892128fcea9a - - - - - 2dd0d58b by Andreas Tille at 2019-11-18T13:21:18Z Lots of more python to python3 conversions - - - - - c224015a by Andreas Tille at 2019-11-18T14:33:14Z Integer division in Python3 - - - - - 927512e6 by Andreas Tille at 2019-11-18T15:03:15Z Upload to unstable - - - - - f24b7807 by Andreas Tille at 2019-11-22T09:48:29Z Depends: python3-distutils - - - - - 9b2cb3ca by Andreas Tille at 2019-11-22T09:48:54Z Upload to unstable - - - - - 768be6ee by Andreas Tille at 2019-11-24T20:00:07Z Merge tag 'debian/3.13.1+dfsg-2' into debian/stretch-backports - - - - - 46034a86 by Andreas Tille at 2019-11-24T20:01:45Z Rebuild for stretch-backports-sloppy - - - - - ca6d9c2b by Andreas Tille at 2019-11-27T14:30:17Z Stretch has python3-distutils-extra - - - - - 30 changed files: - + .gitignore - − LICENSE - − README - + README.md - − VERSION - + assembler/.gitignore - GPLv2.txt → assembler/GPLv2.txt - + assembler/LICENSE - + assembler/VERSION - + assembler/changelog.html - + assembler/changer_of_K.py - + assembler/compare_saves.sh - + assembler/configs/.gitignore - configs/cap/gaf.info → assembler/configs/cap/gaf.info - configs/cclean/config.info → assembler/configs/cclean/config.info - configs/corrector/corrector.info → assembler/configs/corrector/corrector.info - configs/corrector/log.properties → assembler/configs/corrector/log.properties - configs/debruijn/careful_mda_mode.info → assembler/configs/debruijn/careful_mda_mode.info - configs/debruijn/careful_mode.info → assembler/configs/debruijn/careful_mode.info - + assembler/configs/debruijn/config.info - configs/debruijn/construction.info → assembler/configs/debruijn/construction.info - configs/debruijn/detail_info_printer.info → assembler/configs/debruijn/detail_info_printer.info - configs/debruijn/distance_estimation.info → assembler/configs/debruijn/distance_estimation.info - configs/debruijn/large_genome_mode.info → assembler/configs/debruijn/large_genome_mode.info - + assembler/configs/debruijn/log.properties - configs/debruijn/mda_mode.info → assembler/configs/debruijn/mda_mode.info - configs/debruijn/meta_mode.info → assembler/configs/debruijn/meta_mode.info - configs/debruijn/moleculo_mode.info → assembler/configs/debruijn/moleculo_mode.info - + assembler/configs/debruijn/pe_params.info - configs/debruijn/plasmid_mode.info → assembler/configs/debruijn/plasmid_mode.info The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/spades/compare/77e69f048847fc0f6efa9678664ae8955e104fef...ca6d9c2bcd8cc26273c0de26b1d6c7c9d5733c29 -- View it on GitLab: https://salsa.debian.org/med-team/spades/compare/77e69f048847fc0f6efa9678664ae8955e104fef...ca6d9c2bcd8cc26273c0de26b1d6c7c9d5733c29 You're receiving this email because of your account on salsa.debian.org.
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